RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ZMYM3Q14202 1370 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 SLFN14P0C7P3 912 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 LLGL1Q15334 1064 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 KCTD1Q719H9 257 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 VSTM4Q8IW00 320 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 TBCKQ8TEA7 893 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 ALKBH8Q96BT7 664 aaKnown RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 SPTLC3Q9NUV7 552 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 OSBPP22059 807 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 ARPP19P56211 112 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 RNF207Q6ZRF8 634 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 BZW1Q7L1Q6 419 aaKnown RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 GRAMD1CQ8IYS0 662 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 PANX2Q96RD6 677 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 YY1AP1Q9H869 796 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 DIS3Q9Y2L1 958 aaKnown RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 ATP10DQ9P241 1426 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 SLC7A5Q01650 507 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 FOXD4Q12950 439 aaPredicted RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 SURF1Q15526 300 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 TRPC5Q9UL62 973 aaPredicted RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 NDUFA10O95299 355 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 CD58P19256 250 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 CASP8Q14790 479 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 C16orf87Q6PH81 154 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 HSPH1Q92598 858 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 FAF2Q96CS3 445 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 EMILIN3Q9NT22 766 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 M0R2C6 588 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 MEIS1O00470 390 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 RWDD2BP57060 319 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 KRT33BQ14525 404 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 SULF1Q8IWU6 871 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 RNF139Q8WU17 664 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 ADD3Q9UEY8 706 aaKnown RBP15.99■□□□□ 0.15
LMX1B-201ENST00000355497 FSCBQ5H9T9 825 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 CEP70Q8NHQ1 597 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 MAP4K1Q92918 833 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 BCS1LQ9Y276 419 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 L3MBTL1Q9Y468 752 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 ZNF804BA4D1E1 1349 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 APBA3O96018 575 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 MXI1P50539 228 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 CLCN6P51797 869 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 FLOT2Q14254 428 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 NUGGCQ68CJ6 796 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 ARMCX2Q7L311 632 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 VPS39Q96JC1 886 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 TRIM55Q9BYV6 548 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 ZWILCHQ9H900 591 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 MAN1A2O60476 641 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 MMP1P03956 469 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 SPARCL1Q14515 664 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 PPP4R4Q6NUP7 873 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 APOA5Q6Q788 366 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 FRA10AC1Q70Z53 315 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 SPICE1Q8N0Z3 855 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
LMX1B-201ENST00000355497 PLAAQ9Y263 795 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 COPEO14579 308 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 DDIT3P35638 169 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 CDC37Q16543 378 aaPredicted RBP15.99■□□□□ 0.15
LMX1B-201ENST00000355497 DPY19L2Q6NUT2 758 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 ZC3H18Q86VM9 953 aaKnown RBP15.99■□□□□ 0.15
LMX1B-201ENST00000355497 NSUN7Q8NE18 718 aaKnown RBP15.99■□□□□ 0.15
LMX1B-201ENST00000355497 PITPNM3Q9BZ71 974 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 ABCB6Q9NP58 842 aa15.99■□□□□ 0.15
LMX1B-201ENST00000355497 A0A0G2JND7 137 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 SYCE1LA8MT33 242 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 E2F6O75461 281 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 KRT37O76014 449 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 ACSL3O95573 720 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 ENOX1Q8TC92 643 aaKnown RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 SNX19Q92543 992 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 PARVGQ9HBI0 331 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 HACD3Q9P035 362 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 ITM2BQ9Y287 266 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 TMPRSS15P98073 1019 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 HABP4Q5JVS0 413 aaKnown RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 KRT27Q7Z3Y8 459 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 HIPK4Q8NE63 616 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 TEX12Q9BXU0 123 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 KLC2Q9H0B6 622 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 CIAO1O76071 339 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 CCNE1P24864 410 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 PAPOLAP51003 745 aaKnown RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 KRT39Q6A163 491 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 CDHR1Q96JP9 859 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 PIGSQ96S52 555 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 TRPV6Q9H1D0 765 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 TBX22Q9Y458 520 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 HDLBPQ00341 1268 aaKnown RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 KIF23Q02241 960 aaPredicted RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 ALCAMQ13740 583 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 TBCCQ15814 346 aa15.98■□□□□ 0.15
LMX1B-201ENST00000355497 WDR75Q8IWA0 830 aaKnown RBP15.98■□□□□ 0.15
LMX1B-201ENST00000355497 ELAC2Q9BQ52 826 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms