RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 FOXR2Q6PJQ5 311 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 KSR1Q8IVT5 923 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 PURBQ96QR8 312 aaKnown RBP17.18■□□□□ 0.34
MBD1-205ENST00000353909 RBBP6Q7Z6E9 1792 aaKnown RBP17.18■□□□□ 0.34
MBD1-205ENST00000353909 ALAS1P13196 640 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 TRAF1Q13077 416 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 MTMR2Q13614 643 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 KNOP1Q1ED39 458 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 KIAA1328Q86T90 577 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 PRPF38AQ8NAV1 312 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 WNK4Q96J92 1243 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 CCDC42Q96M95 316 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 CEP63Q96MT8 703 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 NAPGQ99747 312 aaPredicted RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 WDR11Q9BZH6 1224 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 DEFB129Q9H1M3 183 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 HAUS4Q9H6D7 363 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■□□□ 12
MBD1-205ENST00000353909 BRCA1P38398 1863 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 EIF3CLB5ME19 914 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 IPO5O00410 1097 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 HNRNPH3P31942 346 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 CYLC1P35663 651 aaPredicted RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 EIF4A3P38919 411 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 TNIP1Q15025 636 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 ZC2HC1CQ53FD0 456 aaPredicted RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 BANK1Q8NDB2 785 aa17.17■□□□□ 0.34
MBD1-205ENST00000353909 EIF3CQ99613 913 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 CNOT7Q9UIV1 285 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 DDX41Q9UJV9 622 aaKnown RBP17.17■□□□□ 0.34
MBD1-205ENST00000353909 GCNT3O95395 438 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 NMT1P30419 496 aaKnown RBP17.16■□□□□ 0.34
MBD1-205ENST00000353909 CASP4P49662 377 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 HSD17B4P51659 736 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 MACROD2A1Z1Q3 448 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 CLIC2O15247 247 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 C1orf186Q6ZWK4 172 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 CCDC170Q8IYT3 715 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 NEK11Q8NG66 645 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 MYH10P35580 1976 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 TLR2O60603 784 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 FLOT1O75955 427 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 AKAP3O75969 853 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 KRT83P78385 493 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 AMPD2Q01433 879 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 ZC3H3Q8IXZ2 948 aaKnown RBP17.16■□□□□ 0.34
MBD1-205ENST00000353909 ZKSCAN4Q969J2 545 aaPredicted RBP17.16■□□□□ 0.34
MBD1-205ENST00000353909 LSM14BQ9BX40 385 aaKnown RBP17.16■□□□□ 0.34
MBD1-205ENST00000353909 KCNH7Q9NS40 1196 aa17.16■□□□□ 0.34
MBD1-205ENST00000353909 ASTN1O14525 1302 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 CETN3O15182 167 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 SRGAP2O75044 1071 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 TBCAO75347 108 aaKnown RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 SEC31AO94979 1220 aaKnown RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 ATP1A1P05023 1023 aaKnown RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 VCAM1P19320 739 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 KIF11P52732 1056 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 MARSP56192 900 aaKnown RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 CDK17Q00537 523 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 KCNH2Q12809 1159 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 B3GNT9Q6UX72 402 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 CACNA2D4Q7Z3S7 1137 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 SH2D3AQ9BRG2 576 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 MXRA8Q9BRK3 442 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 KIAA1683Q9H0B3 1180 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 TRAF3IP3Q9Y228 551 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 HOXA7P31268 230 aaPredicted RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 POLR2FP61218 127 aaKnown RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 MRPS9P82933 396 aaKnown RBP17.15■□□□□ 0.34
MBD1-205ENST00000353909 SPP2Q13103 211 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 HGSNATQ68CP4 663 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 TUFT1Q9NNX1 390 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
MBD1-205ENST00000353909 ACTN1P12814 892 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 TNFAIP1Q13829 316 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 PDXDC1Q6P996 788 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 TRMT1LQ7Z2T5 733 aaKnown RBP17.14■□□□□ 0.33
MBD1-205ENST00000353909 MYCT1Q8N699 235 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 LXNQ9BS40 222 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 SLC38A10Q9HBR0 1119 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 TGFB1I1O43294 461 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 GFPT1Q06210 699 aaPredicted RBP17.14■□□□□ 0.33
MBD1-205ENST00000353909 COG2Q14746 738 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 PARD6BQ9BYG5 372 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 MTFR1LQ9H019 292 aa17.14■□□□□ 0.33
MBD1-205ENST00000353909 CTNND1O60716 968 aaKnown RBP17.13■□□□□ 0.33
MBD1-205ENST00000353909 KIF20AO95235 890 aa17.13■□□□□ 0.33
MBD1-205ENST00000353909 IPO7O95373 1038 aaKnown RBP17.13■□□□□ 0.33
MBD1-205ENST00000353909 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
MBD1-205ENST00000353909 ITGB3BPQ13352 177 aaPredicted RBP17.13■□□□□ 0.33
MBD1-205ENST00000353909 R3HDM1Q15032 1099 aaKnown RBP17.13■□□□□ 0.33
MBD1-205ENST00000353909 MAEAQ7L5Y9 396 aa17.13■□□□□ 0.33
MBD1-205ENST00000353909 ANKRD13CQ8N6S4 541 aa17.13■□□□□ 0.33
MBD1-205ENST00000353909 TAAR1Q96RJ0 339 aa17.13■□□□□ 0.33
MBD1-205ENST00000353909 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms