RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 HDAC9Q9UKV0 1011 aa26.91■■□□□ 1.9
CPNE1-202ENST00000352393 RAD51CO43502 376 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 NR2F2P24468 414 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 PTK2Q05397 1052 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 IRF2BP2Q7Z5L9 587 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 C1orf131Q8NDD1 294 aaKnown RBP26.9■■□□□ 1.9
CPNE1-202ENST00000352393 CYP3A7-CYP3A51PA0A087WV96 503 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 CYP3A7P24462 503 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 ENOX2Q16206 610 aaKnown RBP26.9■■□□□ 1.9
CPNE1-202ENST00000352393 KCTD1Q719H9 257 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 ADAMTSL1Q8N6G6 1762 aa26.9■■□□□ 1.9
CPNE1-202ENST00000352393 ACTN1P12814 892 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 USP11P51784 963 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 GUCY2FP51841 1108 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 CASP5P51878 434 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 KCTD16Q68DU8 428 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 ZNF571Q7Z3V5 609 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-202ENST00000352393 FRMD5Q7Z6J6 570 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 TAF4BQ92750 862 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 RBM17Q96I25 401 aaKnown RBP26.89■■□□□ 1.9
CPNE1-202ENST00000352393 NGLY1Q96IV0 654 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 C8orf37Q96NL8 207 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 UIMC1Q96RL1 719 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 ANO3Q9BYT9 981 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 GLT8D2Q9H1C3 349 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 RABEP2Q9H5N1 569 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 TRAF3IP3Q9Y228 551 aa26.89■■□□□ 1.9
CPNE1-202ENST00000352393 ATP8B3O60423 1300 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 POTEFA5A3E0 1075 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L15C9J2P7 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L13C9JLJ4 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L11C9JVI0 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L18D6R9N7 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L22D6RA61 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L17D6RBQ6 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L19D6RCP7 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L20D6RJB6 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 POTEIP0CG38 1075 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 HSPA9P38646 679 aaKnown RBP26.89■■□□□ 1.89
CPNE1-202ENST00000352393 STAT3P40763 770 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L24Q0WX57 530 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 USP17L6PQ6QN14 398 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 POTEGQ6S5H5 508 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 POTEEQ6S8J3 1075 aa26.89■■□□□ 1.89
CPNE1-202ENST00000352393 EIF1ADQ8N9N8 165 aaKnown RBP26.89■■□□□ 1.89
CPNE1-202ENST00000352393 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.89■■□□□ 1.893e-13■■■■■ 108.9
CPNE1-202ENST00000352393 ZEB2O60315 1214 aa26.88■■□□□ 1.89
CPNE1-202ENST00000352393 KIF4AO95239 1232 aa26.88■■□□□ 1.89
CPNE1-202ENST00000352393 KRT18P05783 430 aaKnown RBP26.88■■□□□ 1.89
CPNE1-202ENST00000352393 GTF2IP78347 998 aa26.88■■□□□ 1.89
CPNE1-202ENST00000352393 RPS6KA1Q15418 735 aa26.88■■□□□ 1.89
CPNE1-202ENST00000352393 TRADDQ15628 312 aa26.88■■□□□ 1.89
CPNE1-202ENST00000352393 LRRC57Q8N9N7 239 aa26.88■■□□□ 1.89
CPNE1-202ENST00000352393 NENFQ9UMX5 172 aa26.88■■□□□ 1.89
CPNE1-202ENST00000352393 UCHL3P15374 230 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 SPIRE1Q08AE8 756 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 MOXD1Q6UVY6 613 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 EPM2AIP1Q7L775 607 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 BZW2Q9Y6E2 419 aaKnown RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 THSD7AQ9UPZ6 1657 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 ATXN2Q99700 1313 aaKnown RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 ZBTB48P10074 688 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 SLC9A1P19634 815 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 RNASE9P60153 205 aaKnown RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 FAM196AQ6ZSG2 479 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 SLFN12Q8IYM2 578 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 PBKQ96KB5 322 aa26.87■■□□□ 1.89
CPNE1-202ENST00000352393 RNPC3Q96LT9 517 aaKnown RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 TAF1DQ9H5J8 278 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 ARMCX3Q9UH62 379 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-202ENST00000352393 KCNK3O14649 394 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 BBOX1O75936 387 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 AFPP02771 609 aaKnown RBP26.86■■□□□ 1.89
CPNE1-202ENST00000352393 HOXD13P35453 343 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 PRKCIP41743 596 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ATP1A2P50993 1020 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 GIT2Q14161 759 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 QRICH1Q2TAL8 776 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 KLHL7Q8IXQ5 586 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 SCFD2Q8WU76 684 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ISCUQ9H1K1 167 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ZHX3Q9H4I2 956 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 BHMG1C9JSJ3 638 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ECHS1P30084 290 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ERVK-9P63128 1117 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ETNPPLQ8TBG4 499 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ACTRT1Q8TDG2 376 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 CRYGNQ8WXF5 182 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 ATP6V1G3Q96LB4 118 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 SPAG5Q96R06 1193 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 NAGPAQ9UK23 515 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 SUGT1Q9Y2Z0 365 aa26.86■■□□□ 1.89
CPNE1-202ENST00000352393 PON1P27169 355 aa26.85■■□□□ 1.89
CPNE1-202ENST00000352393 ANXA13P27216 316 aa26.85■■□□□ 1.89
CPNE1-202ENST00000352393 IFI16Q16666 785 aaKnown RBP26.85■■□□□ 1.89
CPNE1-202ENST00000352393 KNOP1Q1ED39 458 aaKnown RBP26.85■■□□□ 1.89
CPNE1-202ENST00000352393 UBR3Q6ZT12 1888 aa26.85■■□□□ 1.89
CPNE1-202ENST00000352393 NR1D1P20393 614 aa26.84■■□□□ 1.89
CPNE1-202ENST00000352393 SFR1Q86XK3 245 aa26.84■■□□□ 1.89
CPNE1-202ENST00000352393 CATSPER3Q86XQ3 398 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms