RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ZNF302Q9NR11 478 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 SAR1BQ9Y6B6 198 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 PABPN1LA6NDY0 278 aaKnown RBP14.94□□□□□ -0.02
SMC6-201ENST00000351948 SOWAHDA6NJG2 315 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 KRT222Q8N1A0 295 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 HPS5Q9UPZ3 1129 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
SMC6-201ENST00000351948 MFAP3P55082 362 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 PPP4CP60510 307 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 KAZNQ674X7 775 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 FASTKD5Q7L8L6 764 aaKnown RBP14.94□□□□□ -0.02
SMC6-201ENST00000351948 ERO1AQ96HE7 468 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 IGSF3O75054 1194 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 MYL1P05976 194 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 INPP5BP32019 993 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 KRT76Q01546 638 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 COASYQ13057 564 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 TTLL4Q14679 1199 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 CFAP221Q4G0U5 840 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 VPS18Q9P253 973 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 TAL1P17542 331 aaPredicted RBP14.94□□□□□ -0.02
SMC6-201ENST00000351948 ATP2C1P98194 919 aaPredicted RBP14.94□□□□□ -0.02
SMC6-201ENST00000351948 NBPF12Q5TAG4 269 aaPredicted RBP14.94□□□□□ -0.02
SMC6-201ENST00000351948 SYCE1Q8N0S2 351 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 ATP6V0A4Q9HBG4 840 aa14.94□□□□□ -0.02
SMC6-201ENST00000351948 REREQ9P2R6 1566 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 MRPS9P82933 396 aaKnown RBP14.93□□□□□ -0.02
SMC6-201ENST00000351948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMC6-201ENST00000351948 UTP11Q9Y3A2 253 aaKnown RBP14.93□□□□□ -0.02
SMC6-201ENST00000351948 STAM2O75886 525 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 HPDP32754 393 aaPredicted RBP14.93□□□□□ -0.02
SMC6-201ENST00000351948 TROAPQ12815 778 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 INPP5FQ9Y2H2 1132 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 DENND3A2RUS2 1198 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 P4HBP07237 508 aaKnown RBP14.93□□□□□ -0.02
SMC6-201ENST00000351948 TCP11X2Q5H9J9 407 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 STXBP3O00186 592 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 TXNP10599 105 aaKnown RBP14.93□□□□□ -0.02
SMC6-201ENST00000351948 GCLMP48507 274 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
SMC6-201ENST00000351948 LRFN2Q9ULH4 789 aa14.93□□□□□ -0.02
SMC6-201ENST00000351948 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 NEDD9Q14511 834 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 SAAL1Q96ER3 474 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 CYP2B6P20813 491 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 CASC4Q6P4E1 433 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 LPAR1Q92633 364 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 ZDHHC15Q96MV8 337 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 PLCD4Q9BRC7 762 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 FAM213AQ9BRX8 229 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.92□□□□□ -0.02
SMC6-201ENST00000351948 PSMD2Q13200 908 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 TRIM58Q8NG06 486 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 PPANQ9NQ55 473 aaKnown RBP14.92□□□□□ -0.02
SMC6-201ENST00000351948 CCL15-CCL14A0A0B4J2E2 113 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 LPXNO60711 386 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 CCL15Q16663 113 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 IQCDQ96DY2 449 aa14.92□□□□□ -0.02
SMC6-201ENST00000351948 FBXO2Q9UK22 296 aaPredicted RBP14.92□□□□□ -0.02
SMC6-201ENST00000351948 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 SMIM22K7EJ46 135 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 CLDN3O15551 220 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 OPA1O60313 960 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 RPS12P25398 132 aaKnown RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 KRT81Q14533 505 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 TMEM60Q9H2L4 133 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 GPBP1L1Q9HC44 474 aaPredicted RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 FAM184BQ9ULE4 1060 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 NWD1Q149M9 1564 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 ACTN4O43707 911 aaKnown RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 USP11P51784 963 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 GRIK5Q16478 980 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 RPF1Q9H9Y2 349 aaKnown RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 BCL2L12Q9HB09 334 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 STIM2Q9P246 746 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 ZNF233A6NK53 670 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 NR3C2P08235 984 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 TGFB2P61812 414 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 SF3A3Q12874 501 aaKnown RBP eCLIP14.91□□□□□ -0.022e-10■■■■□ 21.6
SMC6-201ENST00000351948 RBM46Q8TBY0 533 aaKnown RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 ZNF653Q96CK0 615 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 GGPS1O95749 300 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 NR3C1P04150 777 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 EIF4A3P38919 411 aaKnown RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 ETF1P62495 437 aaKnown RBP14.91□□□□□ -0.02
SMC6-201ENST00000351948 GRIN1Q05586 938 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 MAPK6Q16659 721 aa14.91□□□□□ -0.02
SMC6-201ENST00000351948 KRIT1O00522 736 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 PLSCR1O15162 318 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 ATP2A2P16615 1042 aaKnown RBP14.9□□□□□ -0.02
SMC6-201ENST00000351948 CXCR5P32302 372 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 SNAPC2Q13487 334 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 CAPN12Q6ZSI9 719 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 MCPH1Q8NEM0 835 aa14.9□□□□□ -0.02
SMC6-201ENST00000351948 HAUS4Q9H6D7 363 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms