RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TTC38Q5R3I4 469 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 ZNF530Q6P9A1 599 aaPredicted RBP14.4□□□□□ -0.1
IFT88-202ENST00000351808 LCA5Q86VQ0 697 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 TTC8Q8TAM2 541 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 UHMK1Q8TAS1 419 aaKnown RBP14.4□□□□□ -0.1
IFT88-202ENST00000351808 MAF1Q9H063 256 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 KDM3BQ7LBC6 1761 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 LIFRP42702 1097 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 MCL1Q07820 350 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 CNGA2Q16280 664 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 RASIP1Q5U651 963 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 GALNT17Q6IS24 598 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 MIGA2Q7L4E1 593 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 ZSCAN29Q8IWY8 852 aaPredicted RBP14.4□□□□□ -0.1
IFT88-202ENST00000351808 RBBP8NLQ8NC74 664 aaPredicted RBP14.4□□□□□ -0.1
IFT88-202ENST00000351808 TBC1D16Q8TBP0 767 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 GBP5Q96PP8 586 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 EPB41L4BQ9H329 900 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 SIK3Q9Y2K2 1263 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 ARL2BPQ9Y2Y0 163 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 SLC4A4Q9Y6R1 1079 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 UNC5CO95185 931 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 GSTA2P09210 222 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 CCNB1P14635 433 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 KCNA3P22001 575 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 ALDH1B1P30837 517 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 ZAP70P43403 619 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 SLCO1A2P46721 670 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 SFSWAPQ12872 951 aaKnown RBP14.4□□□□□ -0.1
IFT88-202ENST00000351808 ZC2HC1CQ53FD0 456 aaPredicted RBP14.4□□□□□ -0.1
IFT88-202ENST00000351808 FAM47EQ6ZV65 393 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 FAM13CQ8NE31 585 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 PGM2Q96G03 612 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 FMO2Q99518 471 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 PLIN2Q99541 437 aa14.4□□□□□ -0.1
IFT88-202ENST00000351808 KRIT1O00522 736 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 NVLO15381 856 aaKnown RBP14.39□□□□□ -0.11
IFT88-202ENST00000351808 FAM200BP0CF97 657 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 ADORA1P30542 326 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 KRT2P35908 639 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 BPIFB4P59827 614 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
IFT88-202ENST00000351808 DZIP3Q86Y13 1208 aaKnown RBP14.39□□□□□ -0.11
IFT88-202ENST00000351808 ANKLE1Q8NAG6 615 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 ZNF333Q96JL9 665 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 TMEM237Q96Q45 408 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 PACSIN1Q9BY11 444 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 MLXIPLQ9NP71 852 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 NMRK1Q9NWW6 199 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 hCG_2014768A0A024R1R8 64 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 CETN3O15182 167 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 GJB6O95452 261 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 BMP15O95972 392 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 HGSNATQ68CP4 663 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 BAP1Q92560 729 aa14.39□□□□□ -0.11
IFT88-202ENST00000351808 CCDC169A6NNP5 214 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 KLRC4O43908 158 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 ATP9AO75110 1047 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 ENTPD5O75356 428 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 PENKP01210 267 aaPredicted RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 IGHMBP2P38935 993 aaKnown RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 USP46P62068 366 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 MGAT5Q09328 741 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 Q4G0T1 1027 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 PTPRN2Q92932 1015 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 P2RX5Q93086 422 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 RNF25Q96BH1 459 aaPredicted RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 CCDC97Q96F63 343 aaPredicted RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 TRIM51Q9BSJ1 452 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 VCX3BQ9H321 246 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 VCX3AQ9NNX9 186 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 NLRC4Q9NPP4 1024 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 GPR108Q9NPR9 543 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 CTTNBP2NLQ9P2B4 639 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 DESP17661 470 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 MCM7P33993 719 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 MPP3Q13368 585 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 CNPY1Q3B7I2 92 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 UBAP2Q5T6F2 1119 aaKnown RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 SOGA3Q5TF21 947 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 ANKRD13DQ6ZTN6 518 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 FAM114A1Q8IWE2 563 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 SLX1AQ9BQ83 275 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 TXLNGYQ9BZA5 131 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 ZMYND12Q9H0C1 365 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 LNPEPQ9UIQ6 1025 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 DBR1Q9UK59 544 aaKnown RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 TMCO1Q9UM00 188 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 LRCH1Q9Y2L9 728 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 NOC2LQ9Y3T9 749 aaKnown RBP14.38□□□□□ -0.11
IFT88-202ENST00000351808 PCDH11XQ9BZA7 1347 aa14.38□□□□□ -0.11
IFT88-202ENST00000351808 RBM47A0AV96 593 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 PFDN1O60925 122 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 AFPP02771 609 aaKnown RBP14.37□□□□□ -0.11
IFT88-202ENST00000351808 SPATA31D3P0C874 917 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 RASA1P20936 1047 aa14.37□□□□□ -0.11
IFT88-202ENST00000351808 CCNE1P24864 410 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms