RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 AVPR2P30518 371 aa18.19■□□□□ 0.5
COPE-202ENST00000349893 SEC23AQ15436 765 aa18.19■□□□□ 0.5
COPE-202ENST00000349893 KLHL23Q8NBE8 558 aa18.19■□□□□ 0.5
COPE-202ENST00000349893 ATP8B4Q8TF62 1192 aa18.19■□□□□ 0.5
COPE-202ENST00000349893 RIOX1Q9H6W3 641 aa18.19■□□□□ 0.5
COPE-202ENST00000349893 BARX2Q9UMQ3 279 aaPredicted RBP18.19■□□□□ 0.5
COPE-202ENST00000349893 SQORQ9Y6N5 450 aa18.19■□□□□ 0.5
COPE-202ENST00000349893 WDR87Q6ZQQ6 2873 aa18.19■□□□□ 0.5
COPE-202ENST00000349893 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 RPLP2P05387 115 aaKnown RBP18.18■□□□□ 0.5
COPE-202ENST00000349893 NRIP1P48552 1158 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 ANKRD45Q5TZF3 282 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 RTN4RL1Q86UN2 441 aaPredicted RBP18.18■□□□□ 0.5
COPE-202ENST00000349893 FCHSD1Q86WN1 690 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 NPAS4Q8IUM7 802 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 POF1BQ8WVV4 589 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 FTHL17Q9BXU8 183 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 AGO3Q9H9G7 860 aaKnown RBP18.18■□□□□ 0.5
COPE-202ENST00000349893 FAM86C1Q9NVL1 165 aa18.18■□□□□ 0.5
COPE-202ENST00000349893 FSD2A1L4K1 749 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 CSPG5O95196 566 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 MARCH8Q5T0T0 291 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
COPE-202ENST00000349893 UTP14CQ5TAP6 766 aaKnown RBP18.17■□□□□ 0.5
COPE-202ENST00000349893 UBAC1Q9BSL1 405 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 KRT23Q9C075 422 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 TUBE1Q9UJT0 475 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 FAM186AA6NE01 2351 aa18.17■□□□□ 0.5
COPE-202ENST00000349893 SDSP20132 328 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 UBE3AQ05086 875 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 PPFIA1Q13136 1202 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 PTPN21Q16825 1174 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 PCNX4Q63HM2 1172 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 XRRA1Q6P2D8 792 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 GIMAP8Q8ND71 665 aaPredicted RBP18.16■□□□□ 0.5
COPE-202ENST00000349893 ATOH1Q92858 354 aaPredicted RBP18.16■□□□□ 0.5
COPE-202ENST00000349893 PIGSQ96S52 555 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 DSCC1Q9BVC3 393 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 ZBTB47Q9UFB7 747 aaPredicted RBP18.16■□□□□ 0.5
COPE-202ENST00000349893 CDY2AQ9Y6F7 541 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 CACNA1AO00555 2505 aa18.16■□□□□ 0.5
COPE-202ENST00000349893 BAZ2BQ9UIF8 2168 aaKnown RBP18.15■□□□□ 0.5
COPE-202ENST00000349893 PNMA6FA0A0J9YX94 578 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 CYTH3O43739 400 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 CD52P31358 61 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 TCF7P36402 384 aaPredicted RBP18.15■□□□□ 0.5
COPE-202ENST00000349893 MRPS6P82932 125 aaKnown RBP18.15■□□□□ 0.5
COPE-202ENST00000349893 KCNC3Q14003 757 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 GRM4Q14833 912 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 GRIK4Q16099 956 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 TMEM184AQ6ZMB5 413 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 FAM43BQ6ZT52 329 aaPredicted RBP18.15■□□□□ 0.5
COPE-202ENST00000349893 VN1R2Q8NFZ6 395 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 DNAJB3Q8WWF6 145 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 RPGRIP1Q96KN7 1286 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 CDCA3Q99618 268 aaPredicted RBP18.15■□□□□ 0.5
COPE-202ENST00000349893 RTEL1Q9NZ71 1219 aa18.15■□□□□ 0.5
COPE-202ENST00000349893 STAG3L1P0CL83 205 aa18.14■□□□□ 0.49
COPE-202ENST00000349893 DUSP6Q16828 381 aa18.14■□□□□ 0.49
COPE-202ENST00000349893 IMMTQ16891 758 aaKnown RBP18.14■□□□□ 0.49
COPE-202ENST00000349893 RBM23Q86U06 439 aaKnown RBP18.14■□□□□ 0.49
COPE-202ENST00000349893 HOMER1Q86YM7 354 aa18.14■□□□□ 0.49
COPE-202ENST00000349893 TLE6Q9H808 572 aa18.14■□□□□ 0.49
COPE-202ENST00000349893 ERAP1Q9NZ08 941 aa18.14■□□□□ 0.49
COPE-202ENST00000349893 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.49
COPE-202ENST00000349893 GVINP1Q7Z2Y8 2422 aa18.13■□□□□ 0.49
COPE-202ENST00000349893 GSTTP1A0A1W2PQM5 241 aa18.13■□□□□ 0.49
COPE-202ENST00000349893 GALR2O43603 387 aaPredicted RBP18.13■□□□□ 0.49
COPE-202ENST00000349893 RIPOR3Q96MK2 946 aa18.13■□□□□ 0.49
COPE-202ENST00000349893 S1PR5Q9H228 398 aa18.13■□□□□ 0.49
COPE-202ENST00000349893 IGSF9BQ9UPX0 1349 aa18.13■□□□□ 0.49
COPE-202ENST00000349893 ZNF292O60281 2723 aa18.13■□□□□ 0.49
COPE-202ENST00000349893 FNDC1Q4ZHG4 1894 aaPredicted RBP18.12■□□□□ 0.49
COPE-202ENST00000349893 PIK3CDO00329 1044 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 SCG2P13521 617 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 KCNA2P16389 499 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 NBL1P41271 181 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 SP4Q02446 784 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 IER5Q5VY09 327 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 PDE12Q6L8Q7 609 aaKnown RBP18.12■□□□□ 0.49
COPE-202ENST00000349893 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 SEPT1Q8WYJ6 367 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 GPRASP2Q96D09 838 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 NEK1Q96PY6 1258 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 TLR9Q9NR96 1032 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 PADI3Q9ULW8 664 aa18.12■□□□□ 0.49
COPE-202ENST00000349893 LOXHD1Q8IVV2 1947 aa18.11■□□□□ 0.49
COPE-202ENST00000349893 H0Y858 1186 aa18.11■□□□□ 0.49
COPE-202ENST00000349893 FSCN2O14926 492 aa18.11■□□□□ 0.49
COPE-202ENST00000349893 ATP9AO75110 1047 aa18.11■□□□□ 0.49
COPE-202ENST00000349893 RBM10P98175 930 aaKnown RBP18.11■□□□□ 0.49
COPE-202ENST00000349893 HDAC1Q13547 482 aaPredicted RBP18.11■□□□□ 0.49
COPE-202ENST00000349893 PAN2Q504Q3 1202 aaKnown RBP18.11■□□□□ 0.49
COPE-202ENST00000349893 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
COPE-202ENST00000349893 ASCL5Q7RTU5 278 aa18.11■□□□□ 0.49
COPE-202ENST00000349893 NLRX1Q86UT6 975 aa18.11■□□□□ 0.49
COPE-202ENST00000349893 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms