RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 C7orf25Q9BPX7 421 aa15.57■□□□□ 0.08
RLIM-202ENST00000349225 ARHGEF3Q9NR81 526 aa15.57■□□□□ 0.08
RLIM-202ENST00000349225 AHCYL1O43865 530 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 SNX3O60493 162 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 SERPING1P05155 500 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 FGFR2P21802 821 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 SLMAPQ14BN4 828 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 RPS6KA1Q15418 735 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 GNPTABQ3T906 1256 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 ASRGL1Q7L266 308 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 CCDC84Q86UT8 332 aaPredicted RBP15.56■□□□□ 0.08
RLIM-202ENST00000349225 PBKQ96KB5 322 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 ZCWPW1Q9H0M4 648 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 ATP6V0A2Q9Y487 856 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 A0A1B0GVG6 124 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 SLC9C1Q4G0N8 1177 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 UTP4Q969X6 686 aaKnown RBP15.56■□□□□ 0.08
RLIM-202ENST00000349225 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 CPSF2Q9P2I0 782 aaKnown RBP15.56■□□□□ 0.08
RLIM-202ENST00000349225 SMIM23A6NLE4 172 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 CES2O00748 559 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 BNIP1Q12981 228 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 ZC3H12AQ5D1E8 599 aaKnown RBP15.56■□□□□ 0.08
RLIM-202ENST00000349225 CWF19L1Q69YN2 538 aaKnown RBP15.56■□□□□ 0.08
RLIM-202ENST00000349225 BLIDQ8IZY5 108 aa15.56■□□□□ 0.08
RLIM-202ENST00000349225 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.56■□□□□ 0.08
RLIM-202ENST00000349225 RNF41Q9H4P4 317 aaPredicted RBP15.56■□□□□ 0.08
RLIM-202ENST00000349225 UBR2Q8IWV8 1755 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 POLR2FP61218 127 aaKnown RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 INF2Q27J81 1249 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 NAF1Q96HR8 494 aaKnown RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 MMTAG2Q9BU76 263 aaKnown RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 AZI2Q9H6S1 392 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 KCPQ6ZWJ8 1503 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 KRIT1O00522 736 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 VIMP08670 466 aaKnown RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 GNAT1P11488 350 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 ATP2A2P16615 1042 aaKnown RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 COPB2P35606 906 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 MSH2P43246 934 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 SFMBT2Q5VUG0 894 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 SLC30A9Q6PML9 568 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 THEMISQ8N1K5 641 aaPredicted RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 ZBTB38Q8NAP3 1195 aaPredicted RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 SLC17A8Q8NDX2 589 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.55■□□□□ 0.08
RLIM-202ENST00000349225 ZDHHC18Q9NUE0 388 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 IRAK4Q9NWZ3 460 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
RLIM-202ENST00000349225 FAM133AQ8N9E0 248 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 SYT15Q9BQS2 421 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 CCDC134Q9H6E4 229 aa15.55■□□□□ 0.08
RLIM-202ENST00000349225 PGRMC1O00264 195 aaKnown RBP15.54■□□□□ 0.08
RLIM-202ENST00000349225 RTN3O95197 1032 aaPredicted RBP15.54■□□□□ 0.08
RLIM-202ENST00000349225 GNAZP19086 355 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 COBLL1Q53SF7 1204 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 TRIM68Q6AZZ1 485 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 CABP7Q86V35 215 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 FITM2Q8N6M3 262 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 PAPOLBQ9NRJ5 636 aaKnown RBP15.54■□□□□ 0.08
RLIM-202ENST00000349225 SAMD15Q9P1V8 674 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 CEP72Q9P209 647 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 ANAPC4Q9UJX5 808 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 ARAP2Q8WZ64 1704 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 RBM5P52756 815 aaKnown RBP eCLIP15.54■□□□□ 0.08
RLIM-202ENST00000349225 COPS2P61201 443 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 RNASELQ05823 741 aaKnown RBP15.54■□□□□ 0.08
RLIM-202ENST00000349225 KLHL29Q96CT2 875 aa15.54■□□□□ 0.08
RLIM-202ENST00000349225 INTS9Q9NV88 658 aaKnown RBP15.54■□□□□ 0.08
RLIM-202ENST00000349225 TLDC2A0PJX2 215 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 UQCRFS1P1P0C7P4 283 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 MGAT5Q09328 741 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 TRAF1Q13077 416 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 LRRC41Q15345 812 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 TAF11Q15544 211 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 SLC35G1Q2M3R5 365 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 TAF4BQ92750 862 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 ITFG2Q969R8 447 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 PCDHA6Q9UN73 950 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 PCDHA8Q9Y5H6 950 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 PGM2Q96G03 612 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 CRAMP1Q96RY5 1269 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.084e-6■■□□□ 12.8
RLIM-202ENST00000349225 MYMKA6NI61 221 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 NUDT17P0C025 328 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 GNAT2P19087 354 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 CCDC38Q502W7 563 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 RASGEF1CQ8N431 466 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 PHC3Q8NDX5 983 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 RMDN2Q96LZ7 410 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 FMO2Q99518 471 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 LSM14BQ9BX40 385 aaKnown RBP15.53■□□□□ 0.08
RLIM-202ENST00000349225 FGFR1OP2Q9NVK5 253 aa15.53■□□□□ 0.08
RLIM-202ENST00000349225 TNS3Q68CZ2 1445 aa15.52■□□□□ 0.08
RLIM-202ENST00000349225 MYH3P11055 1940 aa15.52■□□□□ 0.08
RLIM-202ENST00000349225 SPDYE3A6NKU9 549 aa15.52■□□□□ 0.08
RLIM-202ENST00000349225 MPHOSPH10O00566 681 aaKnown RBP15.52■□□□□ 0.08
RLIM-202ENST00000349225 GM2AP17900 193 aa15.52■□□□□ 0.08
RLIM-202ENST00000349225 LRRC14Q15048 493 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms