RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 EIF3CLB5ME19 914 aaKnown RBP23.5■■□□□ 1.35
PTPN18-202ENST00000347849 FZD9O00144 591 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 EML1O00423 815 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 MCM3P25205 808 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 ZNF76P36508 570 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 CENPPQ6IPU0 288 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 EIF3CQ99613 913 aaKnown RBP23.5■■□□□ 1.35
PTPN18-202ENST00000347849 HINFPQ9BQA5 517 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 PRPF6O94906 941 aaKnown RBP23.5■■□□□ 1.35
PTPN18-202ENST00000347849 EEF1GP26641 437 aaKnown RBP23.5■■□□□ 1.35
PTPN18-202ENST00000347849 CYP4A11Q02928 519 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 COASYQ13057 564 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 ARSHQ5FYA8 562 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 CCDC125Q86Z20 511 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 GSPT2Q8IYD1 628 aaKnown RBP23.5■■□□□ 1.35
PTPN18-202ENST00000347849 CNOT6LQ96LI5 555 aaKnown RBP23.5■■□□□ 1.35
PTPN18-202ENST00000347849 AGPAT5Q9NUQ2 364 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 FEM1BQ9UK73 627 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 GCOM1H8Y6P7 765 aaPredicted RBP23.49■■□□□ 1.35
PTPN18-202ENST00000347849 ZNF185O15231 689 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 CYP3A4P08684 503 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 POLR2MP0CAP2 368 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 ERCC3P19447 782 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 KRT83P78385 493 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 COG1Q8WTW3 980 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 TUBGCP2Q9BSJ2 902 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 LACRTQ9GZZ8 138 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 NT5C3AQ9H0P0 336 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 SH2D4AQ9H788 454 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 CD2APQ9Y5K6 639 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 KDM3AQ9Y4C1 1321 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 CYP11B2P19099 503 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 RPS12P25398 132 aaKnown RBP23.49■■□□□ 1.35
PTPN18-202ENST00000347849 KLK7P49862 253 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 COBLL1Q53SF7 1204 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 MCTP2Q6DN12 878 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 CAGE1Q8TC20 777 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 POLD4Q9HCU8 107 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 DUSP10Q9Y6W6 482 aa23.49■■□□□ 1.35
PTPN18-202ENST00000347849 RCCD1A6NED2 376 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 TBX3O15119 743 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 KRT86O43790 486 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 GGCXP38435 758 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 FAM160B2Q86V87 743 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 GPBP1Q86WP2 473 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 BCAS3Q9H6U6 928 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 PANK4Q9NVE7 773 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 RGL1Q9NZL6 768 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 A0A1W2PQC6 194 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 BICDL2A1A5D9 508 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 PLA2G6O60733 806 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 SLC12A3P55017 1021 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 PLCD3Q8N3E9 789 aa23.48■■□□□ 1.35
PTPN18-202ENST00000347849 MYBL2P10244 700 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 MAGEA9P43362 315 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 PABPC4Q13310 644 aaKnown RBP eCLIP23.47■■□□□ 1.353e-6■■■■□ 26.6
PTPN18-202ENST00000347849 FAM20AQ96MK3 541 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 MAGEC2Q9UBF1 373 aaPredicted RBP23.47■■□□□ 1.35
PTPN18-202ENST00000347849 TARSL2A2RTX5 802 aaKnown RBP23.47■■□□□ 1.35
PTPN18-202ENST00000347849 NFIBO00712 420 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 TNFAIP1Q13829 316 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 MIIPQ5JXC2 388 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 CPXCR1Q8N123 301 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 GUF1Q8N442 669 aaKnown RBP23.47■■□□□ 1.35
PTPN18-202ENST00000347849 JADE2Q9NQC1 790 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 COL20A1Q9P218 1284 aa23.47■■□□□ 1.35
PTPN18-202ENST00000347849 ZC3H4Q9UPT8 1303 aaKnown RBP23.46■■□□□ 1.35
PTPN18-202ENST00000347849 RASSF10A6NK89 507 aa23.46■■□□□ 1.35
PTPN18-202ENST00000347849 PDE2AO00408 941 aaPredicted RBP23.46■■□□□ 1.35
PTPN18-202ENST00000347849 TRIM21P19474 475 aaKnown RBP23.46■■□□□ 1.35
PTPN18-202ENST00000347849 CKAP4Q07065 602 aaKnown RBP23.46■■□□□ 1.35
PTPN18-202ENST00000347849 RPGRIP1Q96KN7 1286 aa23.46■■□□□ 1.35
PTPN18-202ENST00000347849 CRACR2AQ9BSW2 395 aa23.46■■□□□ 1.35
PTPN18-202ENST00000347849 NHEJ1Q9H9Q4 299 aaPredicted RBP23.46■■□□□ 1.35
PTPN18-202ENST00000347849 MRPL11Q9Y3B7 192 aaKnown RBP23.46■■□□□ 1.35
PTPN18-202ENST00000347849 PCDHA2Q9Y5H9 948 aa23.46■■□□□ 1.35
PTPN18-202ENST00000347849 RPA1P27694 616 aa23.45■■□□□ 1.35
PTPN18-202ENST00000347849 NOP2P46087 812 aaKnown RBP23.45■■□□□ 1.35
PTPN18-202ENST00000347849 CYP27A1Q02318 531 aa23.45■■□□□ 1.35
PTPN18-202ENST00000347849 MTMR2Q13614 643 aa23.45■■□□□ 1.35
PTPN18-202ENST00000347849 CCNI2Q6ZMN8 369 aaPredicted RBP23.45■■□□□ 1.35
PTPN18-202ENST00000347849 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.45■■□□□ 1.35
PTPN18-202ENST00000347849 ZKSCAN4Q969J2 545 aaPredicted RBP23.45■■□□□ 1.35
PTPN18-202ENST00000347849 EFCC1Q9HA90 598 aa23.45■■□□□ 1.35
PTPN18-202ENST00000347849 CCPG1Q9ULG6 757 aa23.45■■□□□ 1.35
PTPN18-202ENST00000347849 MACROD2A1Z1Q3 448 aa23.45■■□□□ 1.34
PTPN18-202ENST00000347849 PPFIA4O75335 1185 aa23.45■■□□□ 1.34
PTPN18-202ENST00000347849 CYLC1P35663 651 aaPredicted RBP23.45■■□□□ 1.34
PTPN18-202ENST00000347849 DNM2P50570 870 aa23.45■■□□□ 1.34
PTPN18-202ENST00000347849 EHBP1Q8NDI1 1231 aa23.45■■□□□ 1.34
PTPN18-202ENST00000347849 TRPM4Q8TD43 1214 aa23.45■■□□□ 1.34
PTPN18-202ENST00000347849 NOC3LQ8WTT2 800 aaKnown RBP23.45■■□□□ 1.34
PTPN18-202ENST00000347849 SELENOOQ9BVL4 669 aa23.45■■□□□ 1.34
PTPN18-202ENST00000347849 ZNHIT6Q9NWK9 470 aaKnown RBP23.45■■□□□ 1.34
PTPN18-202ENST00000347849 LTBP3Q9NS15 1303 aa23.45■■□□□ 1.34
PTPN18-202ENST00000347849 CHMP2AO43633 222 aa23.44■■□□□ 1.34
PTPN18-202ENST00000347849 ARP10275 920 aa23.44■■□□□ 1.34
PTPN18-202ENST00000347849 FAM26FQ5R3K3 315 aa23.44■■□□□ 1.34
PTPN18-202ENST00000347849 HOOK2Q96ED9 719 aa23.44■■□□□ 1.34
PTPN18-202ENST00000347849 LRRC27Q9C0I9 530 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms