RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 STXBP2Q15833 593 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 CCDC6Q16204 474 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 CEP85LQ5SZL2 805 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 ALKBH5Q6P6C2 394 aaKnown RBP16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 GUF1Q8N442 669 aaKnown RBP16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 CCSER1Q9C0I3 900 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 ANKRD36BP1Q96IX9 119 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 ANAPC4Q9UJX5 808 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 TEX33O43247 280 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 CASC4Q6P4E1 433 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 USP49Q70CQ1 688 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 FAM81BQ96LP2 452 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 SMC6Q96SB8 1091 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 VPS37BQ9H9H4 285 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 NR3C1P04150 777 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 FGFR2P21802 821 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 MARK3P27448 753 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 ALDH3A1P30838 453 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 KRT76Q01546 638 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 KIF22Q14807 665 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 MAGOHBQ96A72 148 aaKnown RBP16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 CEP63Q96MT8 703 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 NACA2Q9H009 215 aa16.97■□□□□ 0.31
CARMIL3-201ENST00000342740 ZNF233A6NK53 670 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 CAPN9O14815 690 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 THAP12O43422 761 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 ENTPD3O75355 529 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 PPP4CP60510 307 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 OSTNP61366 133 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 TROAPQ12815 778 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 KRT81Q14533 505 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 B4GALNT4Q76KP1 1039 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 ZBTB33Q86T24 672 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 CCDC125Q86Z20 511 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 MCPH1Q8NEM0 835 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 GRK7Q8WTQ7 553 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 MED10Q9BTT4 135 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 ABHD10Q9NUJ1 306 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 PDHBP11177 359 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 PDIA5Q14554 519 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 PPP2R5DQ14738 602 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 INTS8Q75QN2 995 aaKnown RBP16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 APOBEC3FQ8IUX4 373 aaKnown RBP16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 RIOK1Q9BRS2 568 aaKnown RBP16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 ZMYND15Q9H091 742 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 ZNF148Q9UQR1 794 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 SLIT1O75093 1534 aa16.96■□□□□ 0.31
CARMIL3-201ENST00000342740 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.3
CARMIL3-201ENST00000342740 RGS16O15492 202 aaPredicted RBP16.96■□□□□ 0.3
CARMIL3-201ENST00000342740 P4HBP07237 508 aaKnown RBP16.96■□□□□ 0.3
CARMIL3-201ENST00000342740 MAPK4P31152 587 aa16.96■□□□□ 0.3
CARMIL3-201ENST00000342740 QARSP47897 775 aaKnown RBP16.96■□□□□ 0.3
CARMIL3-201ENST00000342740 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 NDC80O14777 642 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 GYS1P13807 737 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 ITIH3Q06033 890 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 KNOP1Q1ED39 458 aaKnown RBP16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 PLCB1Q9NQ66 1216 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 TTLL3Q9Y4R7 772 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 ZMYND10O75800 440 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 C10orf76Q5T2E6 689 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 KAZNQ674X7 775 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 NEK9Q8TD19 979 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 NLRP4Q96MN2 994 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 TRIM9Q9C026 710 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 PPANQ9NQ55 473 aaKnown RBP16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 PNMA3Q9UL41 463 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 FCER1AP12319 257 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 CEP55Q53EZ4 464 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 TRIM11Q96F44 468 aa16.95■□□□□ 0.3
CARMIL3-201ENST00000342740 XPOTO43592 962 aaKnown RBP16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 LLGL1Q15334 1064 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 BSPRYQ5W0U4 402 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 XXYLT1Q8NBI6 393 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 ARHGAP23Q9P227 1491 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 FDX1P10109 184 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 BFSP1Q12934 665 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 SEMA3FQ13275 785 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 LGSNQ5TDP6 509 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 TOGARAM2Q6ZUX3 1019 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 SMAP1Q8IYB5 467 aaPredicted RBP16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 NUB1Q9Y5A7 615 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 PPM1FP49593 454 aaPredicted RBP16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 KCNB1Q14721 858 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 Q3C1V9 767 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 TXNRD3Q86VQ6 643 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 MSTO1Q9BUK6 570 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 CNTNAP5Q8WYK1 1306 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 PGRMC1O00264 195 aaKnown RBP16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 IQCB1Q15051 598 aa16.94■□□□□ 0.3
CARMIL3-201ENST00000342740 CFAP157Q5JU67 520 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms