RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 KCNF1Q9H3M0 494 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 PPP2R2CQ9Y2T4 447 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 ANKRD26Q9UPS8 1709 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 ERCC6L2Q5T890 1561 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 STXBP3O00186 592 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 RGL2O15211 777 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 GDF11O95390 407 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 TBXAS1P24557 533 aaPredicted RBP8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 HPDP32754 393 aaPredicted RBP8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 CTNNA1P35221 906 aaKnown RBP8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 USP11P51784 963 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 RESTQ13127 1097 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 TFDP2Q14188 446 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 ZNF667Q5HYK9 610 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 BARGINQ6ZT62 677 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 KCTD1Q719H9 257 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 CATSPER4Q7RTX7 472 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 NME8Q8N427 588 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 PSPC1Q8WXF1 523 aaKnown RBP8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 FAM149B1Q96BN6 582 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 ACAD9Q9H845 621 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 FAN1Q9Y2M0 1017 aa8.34□□□□□ -1.07
ATP2B4-201ENST00000341360 USP17L15C9J2P7 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L13C9JLJ4 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L11C9JVI0 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L18D6R9N7 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L22D6RA61 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L17D6RBQ6 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L19D6RCP7 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L20D6RJB6 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 ECE2O60344 883 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SERPING1P05155 500 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 PRELPP51888 382 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 USP17L24Q0WX57 530 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SLMAPQ14BN4 828 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 PFKFB3Q16875 520 aaPredicted RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 XRRA1Q6P2D8 792 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 RPUSD2Q8IZ73 545 aaKnown RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 MB21D1Q8N884 522 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 NEDD1Q8NHV4 660 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 URGCPQ8TCY9 931 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 RABGGTAQ92696 567 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 ZNF653Q96CK0 615 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 PPP1R13BQ96KQ4 1090 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 TRIM31Q9BZY9 425 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 BAG5Q9UL15 447 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 A0A1B0GUA9 196 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 PGRMC1O00264 195 aaKnown RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 WDR46O15213 610 aaKnown RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 NDUFA8P51970 172 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SF3B3Q15393 1217 aaKnown RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 TXNRD1Q16881 649 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 FAM182BQ5T319 152 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 TRIM72Q6ZMU5 477 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 TOGARAM2Q6ZUX3 1019 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SPICE1Q8N0Z3 855 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 ELMOD1Q8N336 334 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 MICALL1Q8N3F8 863 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 BEST2Q8NFU1 509 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 MORC4Q8TE76 937 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 ZNF512BQ96KM6 892 aaPredicted RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 FUCA2Q9BTY2 467 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 EDEM3Q9BZQ6 932 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 FANCLQ9NW38 375 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 KCNH4Q9UQ05 1017 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 IFT172Q9UG01 1749 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SPDYE16A6NNV3 312 aaPredicted RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 CCDC188H7C350 402 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 GH2P01242 217 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 INHBAP08476 426 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 CA4P22748 312 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 EFNA5P52803 228 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 GRM4Q14833 912 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SPDYE2Q495Y8 402 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 STRIP1Q5VSL9 837 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 EFHBQ8N7U6 833 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 TUBB6Q9BUF5 446 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 LARGE1O95461 756 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 ABL1P00519 1130 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 TFAMQ00059 246 aaKnown RBP8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SYNE4Q8N205 404 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 FAM71BQ8TC56 605 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 FAM96AQ9H5X1 160 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 EHD2Q9NZN4 543 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 CDC23Q9UJX2 597 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 KIDINS220Q9ULH0 1771 aa8.33□□□□□ -1.08
ATP2B4-201ENST00000341360 SALL3Q9BXA9 1300 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 PRPSAP2O60256 369 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 P4HBP07237 508 aaKnown RBP8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 TSPY1Q01534 308 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 ITKQ08881 620 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 MTMR1Q13613 665 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 MTERF2Q49AM1 385 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 NUDT18Q6ZVK8 323 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 SAMD3Q8N6K7 520 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 TMEM35BQ8NCS4 154 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 EPSTI1Q96J88 318 aa8.32□□□□□ -1.08
ATP2B4-201ENST00000341360 RMDN3Q96TC7 470 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms