RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 MDH1P40925 334 aaKnown RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 ZNF449Q6P9G9 518 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 ILDR1Q86SU0 546 aaPredicted RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 GUF1Q8N442 669 aaKnown RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 CCT8L2Q96SF2 557 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 MROH2AA6NES4 1674 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 POLR2MP0CAP2 368 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 BFSP1Q12934 665 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 SCYL3Q8IZE3 742 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 PROCA1Q8NCQ7 364 aaPredicted RBP16.06■□□□□ 0.16
RRP1B-201ENST00000340648 BHMT2Q9H2M3 363 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 DAPK3O43293 454 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 MFAP3P55082 362 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 KCNQ4P56696 695 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 XKR9Q5GH70 373 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 CASC4Q6P4E1 433 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.06■□□□□ 0.16
RRP1B-201ENST00000340648 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.06■□□□□ 0.164e-7■■■□□ 14.9
RRP1B-201ENST00000340648 TEKT3Q9BXF9 490 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 ANKZF1Q9H8Y5 726 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 NOP53Q9NZM5 478 aaKnown RBP16.06■□□□□ 0.16
RRP1B-201ENST00000340648 AMACRQ9UHK6 382 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 USP32Q8NFA0 1604 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 CLGNO14967 610 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 FOSP01100 380 aaPredicted RBP16.06■□□□□ 0.16
RRP1B-201ENST00000340648 BARHL2Q9NY43 387 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 STK4Q13043 487 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 ZIM3Q96PE6 472 aa16.06■□□□□ 0.16
RRP1B-201ENST00000340648 SEPT14Q6ZU15 432 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 SPICE1Q8N0Z3 855 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 PCDHA6Q9UN73 950 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 PCDHA8Q9Y5H6 950 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
RRP1B-201ENST00000340648 NDC80O14777 642 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 MAN1A1P33908 653 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 RASA3Q14644 834 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 SLC24A3Q9HC58 644 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 TXLNGQ9NUQ3 528 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 BSDC1Q9NW68 430 aaPredicted RBP16.05■□□□□ 0.16
RRP1B-201ENST00000340648 DNAJC12Q9UKB3 198 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 ATP2B4P23634 1241 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 RAB3IL1Q8TBN0 382 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 VWDEQ8N2E2 1590 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 CARSP49589 748 aaKnown RBP16.05■□□□□ 0.16
RRP1B-201ENST00000340648 SEC24CP53992 1094 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 PMS2P54278 862 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 GRM4Q14833 912 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 SFR1Q86XK3 245 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
RRP1B-201ENST00000340648 OR2W6PQ8NHA6 318 aa16.05■□□□□ 0.16
RRP1B-201ENST00000340648 LSP1P33241 339 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 CHMP6Q96FZ7 201 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 XDHP47989 1333 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 OPHN1O60890 802 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 RHOBTB3O94955 611 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 TDP2O95551 362 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 NBPF9Q3BBW0 867 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 CCDC14Q49A88 953 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 KRT19P08727 400 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 HOXA7P31268 230 aaPredicted RBP16.04■□□□□ 0.16
RRP1B-201ENST00000340648 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
RRP1B-201ENST00000340648 MYO1EQ12965 1108 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 RASIP1Q5U651 963 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 FAM47EQ6ZV65 393 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 KIAA0825Q8IV33 1275 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 GPR101Q96P66 508 aaPredicted RBP16.04■□□□□ 0.16
RRP1B-201ENST00000340648 POTEB3A0JP26 581 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 POTECB2RU33 542 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 POTEBQ6S5H4 581 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 TRAPPC11Q7Z392 1133 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 RUBCNQ92622 972 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 PARVGQ9HBI0 331 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 HAUS2Q9NVX0 235 aa16.04■□□□□ 0.16
RRP1B-201ENST00000340648 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 PTK2Q05397 1052 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 WDR93Q6P2C0 686 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 MIPOL1Q8TD10 442 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 EXOC1LA0A1B0GW35 172 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 LRRC14Q15048 493 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 NCAPGQ9BPX3 1015 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 CCSER1Q9C0I3 900 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 SERPINB13Q9UIV8 391 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 LEMD3Q9Y2U8 911 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 TESPA1A2RU30 521 aaPredicted RBP16.03■□□□□ 0.16
RRP1B-201ENST00000340648 WDR91A4D1P6 747 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
RRP1B-201ENST00000340648 TFRCP02786 760 aaKnown RBP16.03■□□□□ 0.16
RRP1B-201ENST00000340648 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
RRP1B-201ENST00000340648 RCN2Q14257 317 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 BSPRYQ5W0U4 402 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 POMGNT1Q8WZA1 660 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms