RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 POTEMA6NI47 508 aa14□□□□□ -0.17
LIN54-201ENST00000340417 EIF3JO75822 258 aaKnown RBP14□□□□□ -0.17
LIN54-201ENST00000340417 TMEM62Q0P6H9 643 aa14□□□□□ -0.17
LIN54-201ENST00000340417 PAK2Q13177 524 aa14□□□□□ -0.17
LIN54-201ENST00000340417 KRT81Q14533 505 aa14□□□□□ -0.17
LIN54-201ENST00000340417 ASCC2Q9H1I8 757 aaPredicted RBP14□□□□□ -0.17
LIN54-201ENST00000340417 GOLGA8IPA6NC78 632 aa14□□□□□ -0.17
LIN54-201ENST00000340417 ZNF233A6NK53 670 aa14□□□□□ -0.17
LIN54-201ENST00000340417 GOLGA8JA6NMD2 632 aa14□□□□□ -0.17
LIN54-201ENST00000340417 SOCS7O14512 581 aa14□□□□□ -0.17
LIN54-201ENST00000340417 THPOP40225 353 aa14□□□□□ -0.17
LIN54-201ENST00000340417 MFAP3P55082 362 aa14□□□□□ -0.17
LIN54-201ENST00000340417 SNW1Q13573 536 aaKnown RBP14□□□□□ -0.17
LIN54-201ENST00000340417 MAP9Q49MG5 647 aa14□□□□□ -0.17
LIN54-201ENST00000340417 CRACR2AQ9BSW2 395 aa14□□□□□ -0.17
LIN54-201ENST00000340417 TSGA10Q9BZW7 698 aa14□□□□□ -0.17
LIN54-201ENST00000340417 ERAP1Q9NZ08 941 aa14□□□□□ -0.17
LIN54-201ENST00000340417 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
LIN54-201ENST00000340417 MORC3Q14149 939 aa14□□□□□ -0.17
LIN54-201ENST00000340417 FKBP1CQ5VVH2 108 aa14□□□□□ -0.17
LIN54-201ENST00000340417 SCN4BQ8IWT1 228 aa14□□□□□ -0.17
LIN54-201ENST00000340417 GANCQ8TET4 914 aa14□□□□□ -0.17
LIN54-201ENST00000340417 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
LIN54-201ENST00000340417 MAGEB2O15479 319 aa14□□□□□ -0.17
LIN54-201ENST00000340417 ADCY3O60266 1144 aa14□□□□□ -0.17
LIN54-201ENST00000340417 HUS1O60921 280 aa14□□□□□ -0.17
LIN54-201ENST00000340417 MRPL4Q9BYD3 311 aaKnown RBP14□□□□□ -0.17
LIN54-201ENST00000340417 TMEM39AQ9NV64 488 aa14□□□□□ -0.17
LIN54-201ENST00000340417 STK36Q9NRP7 1315 aa14□□□□□ -0.17
LIN54-201ENST00000340417 RRN3P2A6NIE6 340 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 CPB1P15086 417 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 RPS6P62753 249 aaKnown RBP13.99□□□□□ -0.17
LIN54-201ENST00000340417 PTK2Q05397 1052 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 SIX6OS1Q8N1H7 587 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 RYBPQ8N488 228 aaPredicted RBP13.99□□□□□ -0.17
LIN54-201ENST00000340417 SALL1Q9NSC2 1324 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 PQBP1O60828 265 aaKnown RBP13.99□□□□□ -0.17
LIN54-201ENST00000340417 SCARA5Q6ZMJ2 495 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 EPB41L4AQ9HCS5 686 aaPredicted RBP13.99□□□□□ -0.17
LIN54-201ENST00000340417 AAASQ9NRG9 546 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 PPP1R9AQ9ULJ8 1098 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 SLC8A2Q9UPR5 921 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 STRNO43815 780 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 ITKQ08881 620 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 DGKZQ13574 1117 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 PPP1R7Q15435 360 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 ARL6IP4Q66PJ3 421 aaKnown RBP13.99□□□□□ -0.17
LIN54-201ENST00000340417 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 RNF149Q8NC42 400 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 GSDMBQ8TAX9 411 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 TMX2Q9Y320 296 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 XRCC6P12956 609 aaKnown RBP eCLIP13.99□□□□□ -0.17
LIN54-201ENST00000340417 KIF11P52732 1056 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 TAAR1Q96RJ0 339 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 HTATIP2Q9BUP3 242 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 THAP12O43422 761 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 BPIFB4P59827 614 aa13.99□□□□□ -0.17
LIN54-201ENST00000340417 CKAP4Q07065 602 aaKnown RBP13.99□□□□□ -0.17
LIN54-201ENST00000340417 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
LIN54-201ENST00000340417 SLC16A4O15374 487 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 MOB2Q70IA6 237 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 RRAGAQ7L523 313 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 EMILIN3Q9NT22 766 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 STAG3L1P0CL83 205 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 BCCIPQ9P287 314 aaKnown RBP eCLIP13.98□□□□□ -0.17
LIN54-201ENST00000340417 TBC1D8O95759 1140 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 XKR3Q5GH77 459 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 UBL4BQ8N7F7 174 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 SREK1Q8WXA9 508 aaKnown RBP13.98□□□□□ -0.17
LIN54-201ENST00000340417 HEXIM2Q96MH2 286 aaKnown RBP13.98□□□□□ -0.17
LIN54-201ENST00000340417 P2RX7Q99572 595 aaKnown RBP13.98□□□□□ -0.17
LIN54-201ENST00000340417 NUCKS1Q9H1E3 243 aaKnown RBP13.98□□□□□ -0.17
LIN54-201ENST00000340417 KCNJ18B7U540 433 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 KCNJ12Q14500 433 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 VEPH1Q14D04 833 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 EPHA7Q15375 998 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 FBXO16Q8IX29 292 aaPredicted RBP13.98□□□□□ -0.17
LIN54-201ENST00000340417 TRAPPC3O43617 180 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 TADA2AO75478 443 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 CDC27P30260 824 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 KRT17Q04695 432 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 KIAA1683Q9H0B3 1180 aa13.98□□□□□ -0.17
LIN54-201ENST00000340417 TOMM70O94826 608 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 TDP2O95551 362 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 CD58P19256 250 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 XRRA1Q6P2D8 792 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 EIF2AK1Q9BQI3 630 aaKnown RBP13.97□□□□□ -0.17
LIN54-201ENST00000340417 SKILP12757 684 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 PDZD4Q76G19 769 aaPredicted RBP13.97□□□□□ -0.17
LIN54-201ENST00000340417 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 DSG3P32926 999 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 GPC3P51654 580 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 GOLGA8FQ08AF8 430 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 GOLGA8DPQ0D2H9 430 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 HADHQ16836 314 aaKnown RBP13.97□□□□□ -0.17
LIN54-201ENST00000340417 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 MED7O43513 233 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 KPNA6O60684 536 aa13.97□□□□□ -0.17
LIN54-201ENST00000340417 YWHABP31946 246 aaKnown RBP13.97□□□□□ -0.17
LIN54-201ENST00000340417 GLB1LQ6UWU2 654 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms