RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 EDRF1Q3B7T1 1238 aa8□□□□□ -1.13
NUP43-201ENST00000340413 FAM160B1Q5W0V3 765 aa8□□□□□ -1.13
NUP43-201ENST00000340413 C17orf99Q6UX52 265 aa8□□□□□ -1.13
NUP43-201ENST00000340413 IFNL1Q8IU54 200 aa8□□□□□ -1.13
NUP43-201ENST00000340413 CEP63Q96MT8 703 aa8□□□□□ -1.13
NUP43-201ENST00000340413 MTRQ99707 1265 aa8□□□□□ -1.13
NUP43-201ENST00000340413 CREBZFQ9NS37 354 aa8□□□□□ -1.13
NUP43-201ENST00000340413 SAGE1Q9NXZ1 904 aa8□□□□□ -1.13
NUP43-201ENST00000340413 COL4A3BPQ9Y5P4 624 aa8□□□□□ -1.13
NUP43-201ENST00000340413 PPP1R3GB7ZBB8 358 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 TRAF5O00463 557 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 PSMA7O14818 248 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 SLITRK3O94933 977 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 RPLP2P05387 115 aaKnown RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 ZNF18P17022 549 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 CCNE1P24864 410 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 HUNKP57058 714 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 CDKAL1Q5VV42 579 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 NSMFQ6X4W1 530 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 C12orf56Q8IXR9 622 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 RASSF8Q8NHQ8 419 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 TBC1D5Q92609 795 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 FGD4Q96M96 766 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 MAFBQ9Y5Q3 323 aaPredicted RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 LRRC10BA6NIK2 292 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 KIAA0391O15091 583 aaKnown RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 MED24O75448 989 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 SUPT20HL2P0C7V6 817 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 XRCC5P13010 732 aaKnown RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 CYP11B2P19099 503 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 NOGQ13253 232 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 NCAPHQ15003 741 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 CAMK4Q16566 473 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 METTL7BQ6UX53 244 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 ABHD15Q6UXT9 468 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 JPH1Q9HDC5 661 aaPredicted RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 SLC9A2Q9UBY0 812 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 SMCHD1A6NHR9 2005 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 ARP10275 920 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 PAK1Q13153 545 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 ITGB3BPQ13352 177 aaPredicted RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 KMT5BQ4FZB7 885 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 NCAPH2Q6IBW4 605 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 EPM2AIP1Q7L775 607 aaPredicted RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 CKAP2LQ8IYA6 745 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 SCFD2Q8WU76 684 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 SPIRE2Q8WWL2 714 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 GZF1Q9H116 711 aaPredicted RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 GPBP1L1Q9HC44 474 aaPredicted RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 LIMA1Q9UHB6 759 aaKnown RBP7.99□□□□□ -1.13
NUP43-201ENST00000340413 ITIH6Q6UXX5 1313 aa7.99□□□□□ -1.13
NUP43-201ENST00000340413 BECN2A8MW95 431 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 CA12O43570 354 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 TLR2O60603 784 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 PRR29P0C7W0 189 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 POU5F1Q01860 360 aaKnown RBP7.98□□□□□ -1.13
NUP43-201ENST00000340413 POU5F1BQ06416 359 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 IQSEC1Q6DN90 963 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 CENPPQ6IPU0 288 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 C1orf186Q6ZWK4 172 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 NCAPG2Q86XI2 1143 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 MCPH1Q8NEM0 835 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 ANKRD20A12PQ8NF67 263 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 CNKSR2Q8WXI2 1034 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 DRC1Q96MC2 740 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 SEZ6LQ9BYH1 1024 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 PCDHA2Q9Y5H9 948 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 POTEMA6NI47 508 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 KPNA6O60684 536 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 POTEIP0CG38 1075 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 MAP2K2P36507 400 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 KCNJ6P48051 423 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 LAMC2Q13753 1193 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 XKR3Q5GH77 459 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 CCDC62Q6P9F0 684 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 IL31RAQ8NI17 732 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 KIFAP3Q92845 792 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 STRA6Q9BX79 667 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 IVNS1ABPQ9Y6Y0 642 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 SYNRGQ9UMZ2 1314 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 SLC16A3O15427 465 aaKnown RBP7.98□□□□□ -1.13
NUP43-201ENST00000340413 ZNF157P51786 506 aaPredicted RBP7.98□□□□□ -1.13
NUP43-201ENST00000340413 TRIM14Q14142 442 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 TTLL4Q14679 1199 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 DPCR1Q3MIW9 517 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 C11orf57Q6ZUT1 292 aaPredicted RBP7.98□□□□□ -1.13
NUP43-201ENST00000340413 SLC9A9Q8IVB4 645 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 ZNF507Q8TCN5 953 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 SMCR8Q8TEV9 937 aaPredicted RBP7.98□□□□□ -1.13
NUP43-201ENST00000340413 TSG101Q99816 390 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 DNAJC25Q9H1X3 360 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 SCAF8Q9UPN6 1271 aaKnown RBP7.98□□□□□ -1.13
NUP43-201ENST00000340413 KIAA1024Q9UPX6 916 aa7.98□□□□□ -1.13
NUP43-201ENST00000340413 MYMKA6NI61 221 aa7.97□□□□□ -1.13
NUP43-201ENST00000340413 RGS20O76081 388 aa7.97□□□□□ -1.13
NUP43-201ENST00000340413 EIF2AK2P19525 551 aaKnown RBP7.97□□□□□ -1.13
NUP43-201ENST00000340413 PRKG1Q13976 671 aa7.97□□□□□ -1.13
NUP43-201ENST00000340413 GIT2Q14161 759 aa7.97□□□□□ -1.13
NUP43-201ENST00000340413 ARHGEF6Q15052 776 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms