RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 CYP2C19P33261 490 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 POSTNQ15063 836 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 ABHD15Q6UXT9 468 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 TRIB2Q92519 343 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 PAGE5Q96GU1 130 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 DYDC2Q96IM9 177 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 NACC1Q96RE7 527 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 PLIN2Q99541 437 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
NIPAL3-202ENST00000339255 ZNF865P0CJ78 1059 aaPredicted RBP16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 ADCYAP1R1P41586 468 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 TNFAIP2Q03169 654 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 ARHGAP1Q07960 439 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 SV2BQ7L1I2 683 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 SH3RF1Q7Z6J0 888 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 C4orf19Q8IY42 314 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 PPTC7Q8NI37 304 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 PXYLP1Q8TE99 480 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 SEPT1Q8WYJ6 367 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 BLOC1S4Q9NUP1 217 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 IGSF9BQ9UPX0 1349 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 SMC2O95347 1197 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 HMGCRP04035 888 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 MDM2Q00987 491 aaPredicted RBP16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 CAP1Q01518 475 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 SP4Q02446 784 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 ECM1Q16610 540 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 FAM160B1Q5W0V3 765 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 RAET1EQ8TD07 263 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 FAM184BQ9ULE4 1060 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 Q9Y3F1 56 aa16.24■□□□□ 0.19
NIPAL3-202ENST00000339255 EMSYQ7Z589 1322 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 CEP350Q5VT06 3117 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 IGKV6D-21A0A0A0MT36 114 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 BACH1O14867 736 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 GTPBP6O43824 516 aaPredicted RBP16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 ADCY3O60266 1144 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 EYA4O95677 639 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 CYBAP13498 195 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 SMPD1P17405 629 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 SLAIN1Q8ND83 568 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 GPR20Q99678 358 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 BCAS3Q9H6U6 928 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 KCND2Q9NZV8 630 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 KIAA1468Q9P260 1216 aa16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 DBR1Q9UK59 544 aaKnown RBP16.23■□□□□ 0.19
NIPAL3-202ENST00000339255 MYH11P35749 1972 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 AKR1A1P14550 325 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 TCF7P36402 384 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 AFMP43652 599 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 SLC26A2P50443 739 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 HSDL1Q3SXM5 330 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 CNNM4Q6P4Q7 775 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 KCNK18Q7Z418 384 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 CCDC60Q8IWA6 550 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 AFAP1L1Q8TED9 768 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 LRRC15Q8TF66 581 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 AZI2Q9H6S1 392 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 ZNF302Q9NR11 478 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 GABBR1Q9UBS5 961 aa16.22■□□□□ 0.19
NIPAL3-202ENST00000339255 GSTTP1A0A1W2PQM5 241 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 SYCE3A1L190 88 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 PLA2G4BP0C869 781 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 ZNF445P59923 1031 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 PNOCQ13519 176 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 MCM6Q14566 821 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 SWSAP1Q6NVH7 229 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 CKAP2LQ8IYA6 745 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 SYT2Q8N9I0 419 aaPredicted RBP16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 SPATA20Q8TB22 786 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 SMARCE1Q969G3 411 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 GSDMAQ96QA5 445 aa16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 GNEQ9Y223 722 aaKnown RBP16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 MAFBQ9Y5Q3 323 aaPredicted RBP16.21■□□□□ 0.19
NIPAL3-202ENST00000339255 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 E9PMD0 336 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 SORBS3O60504 671 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 LGR5O75473 907 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 HOXD8P13378 290 aaPredicted RBP16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 YWHABP31946 246 aaKnown RBP16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 SLC12A3P55017 1021 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 DPYDQ12882 1025 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 PRAMEF19Q5SWL8 479 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 NT5DC1Q5TFE4 455 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 OTUD6AQ7L8S5 288 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 PLPPR4Q7Z2D5 763 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 TLK2Q86UE8 772 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 OR6J1Q8NGC5 347 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 COPS5Q92905 334 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 FAM167AQ96KS9 214 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 CCDC43Q96MW1 224 aaKnown RBP16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 MTRQ99707 1265 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 C7orf25Q9BPX7 421 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms