RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 HPS3Q969F9 1004 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 SENP7Q9BQF6 1050 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 ERCC5P28715 1186 aaPredicted RBP16.36■□□□□ 0.21
CBX3-201ENST00000337620 PRCPP42785 496 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 STX17P56962 302 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 GRB14Q14449 540 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 CT47A1Q5JQC4 288 aaPredicted RBP16.36■□□□□ 0.21
CBX3-201ENST00000337620 TRMT1LQ7Z2T5 733 aaKnown RBP16.36■□□□□ 0.21
CBX3-201ENST00000337620 FBXO16Q8IX29 292 aaPredicted RBP16.36■□□□□ 0.21
CBX3-201ENST00000337620 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
CBX3-201ENST00000337620 GIMAP8Q8ND71 665 aaPredicted RBP16.36■□□□□ 0.21
CBX3-201ENST00000337620 RDM1Q8NG50 284 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 PANK4Q9NVE7 773 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 TELO2Q9Y4R8 837 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 DOCK5Q9H7D0 1870 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 ADCY5O95622 1261 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 TGFB3P10600 412 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 UBA1P22314 1058 aaKnown RBP16.36■□□□□ 0.21
CBX3-201ENST00000337620 YY1P25490 414 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 TM4SF4P48230 202 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 ACTR2P61160 394 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 STK4Q13043 487 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 UGCGQ16739 394 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 LY6KQ17RY6 165 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 ARMCX2Q7L311 632 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 ZHX3Q9H4I2 956 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 SLC39A2Q9NP94 309 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 CTNND2Q9UQB3 1225 aa16.36■□□□□ 0.21
CBX3-201ENST00000337620 LOC102724159A0A0B4J2E5 919 aa16.35■□□□□ 0.21
CBX3-201ENST00000337620 PSAPP07602 524 aa16.35■□□□□ 0.21
CBX3-201ENST00000337620 PSMC5P62195 406 aa16.35■□□□□ 0.21
CBX3-201ENST00000337620 CRHR2Q13324 411 aa16.35■□□□□ 0.21
CBX3-201ENST00000337620 PWP2Q15269 919 aaKnown RBP16.35■□□□□ 0.21
CBX3-201ENST00000337620 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
CBX3-201ENST00000337620 ENOX1Q8TC92 643 aaKnown RBP16.35■□□□□ 0.21
CBX3-201ENST00000337620 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
CBX3-201ENST00000337620 RUSC1Q9BVN2 902 aa16.35■□□□□ 0.21
CBX3-201ENST00000337620 ARHGEF35A5YM69 484 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 COASYQ13057 564 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 STIM1Q13586 685 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 GIT2Q14161 759 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 NEDD9Q14511 834 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 RINT1Q6NUQ1 792 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 SWSAP1Q6NVH7 229 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 ADSSL1Q8N142 457 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 ZNF784Q8NCA9 323 aaPredicted RBP16.34■□□□□ 0.21
CBX3-201ENST00000337620 MED15Q96RN5 788 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 GABBR1Q9UBS5 961 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 SYNRGQ9UMZ2 1314 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 MCM3APO60318 1980 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 SLC15A5A6NIM6 579 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 CCDC173Q0VFZ6 552 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 DEFB115Q30KQ5 88 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 HERC4Q5GLZ8 1057 aaPredicted RBP16.34■□□□□ 0.21
CBX3-201ENST00000337620 MIS18BP1Q6P0N0 1132 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 KCNV1Q6PIU1 500 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 ABHD15Q6UXT9 468 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 REEP2Q9BRK0 252 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
CBX3-201ENST00000337620 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 POLD4Q9HCU8 107 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
CBX3-201ENST00000337620 NFE2L3Q9Y4A8 694 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 PLXNA1Q9UIW2 1896 aa16.34■□□□□ 0.21
CBX3-201ENST00000337620 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 BACH1O14867 736 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 AOC2O75106 756 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 LYPLA2O95372 231 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 ARIH2O95376 493 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 GGPS1O95749 300 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 YWHABP31946 246 aaKnown RBP16.33■□□□□ 0.21
CBX3-201ENST00000337620 PAK1Q13153 545 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 PSMD2Q13200 908 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 C4orf19Q8IY42 314 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.21
CBX3-201ENST00000337620 PDGFCQ9NRA1 345 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 TBC1D7Q9P0N9 293 aa16.33■□□□□ 0.21
CBX3-201ENST00000337620 FARP2O94887 1054 aaPredicted RBP16.33■□□□□ 0.2
CBX3-201ENST00000337620 NOGQ13253 232 aa16.33■□□□□ 0.2
CBX3-201ENST00000337620 HSP90AA4PQ58FG1 418 aa16.33■□□□□ 0.2
CBX3-201ENST00000337620 UTP14CQ5TAP6 766 aaKnown RBP16.33■□□□□ 0.2
CBX3-201ENST00000337620 C1orf186Q6ZWK4 172 aa16.33■□□□□ 0.2
CBX3-201ENST00000337620 ZNF467Q7Z7K2 595 aaPredicted RBP16.33■□□□□ 0.2
CBX3-201ENST00000337620 ATP6V0A1Q93050 837 aa16.33■□□□□ 0.2
CBX3-201ENST00000337620 MAML3Q96JK9 1138 aa16.33■□□□□ 0.2
CBX3-201ENST00000337620 SLC5A4Q9NY91 659 aa16.33■□□□□ 0.2
CBX3-201ENST00000337620 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.2
CBX3-201ENST00000337620 TMEM150BA6NC51 233 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 PSMA7O14818 248 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 CA12O43570 354 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 SUPT20HL2P0C7V6 817 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
CBX3-201ENST00000337620 EHHADHQ08426 723 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 TPD52L1Q16890 204 aaPredicted RBP16.32■□□□□ 0.2
CBX3-201ENST00000337620 CCDC60Q8IWA6 550 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms