RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 FAM83AQ86UY5 434 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 BAP1Q92560 729 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 ZKSCAN4Q969J2 545 aaPredicted RBP25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 JAKMIP2Q96AA8 810 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 CAPZA3Q96KX2 299 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 HSD17B14Q9BPX1 270 aa25.53■■□□□ 1.68
CLPTM1-201ENST00000337392 FRMD3A2A2Y4 597 aa25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 TBX3O15119 743 aa25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 GMPSP49915 693 aaPredicted RBP25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 CCDC42Q96M95 316 aa25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 NAPGQ99747 312 aaPredicted RBP25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 LSM14BQ9BX40 385 aaKnown RBP25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 MLXIPQ9HAP2 919 aa25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 CYP3A4P08684 503 aa25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 POLR2FP61218 127 aaKnown RBP25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 GFPT1Q06210 699 aaPredicted RBP25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 HINFPQ9BQA5 517 aa25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 DDX41Q9UJV9 622 aaKnown RBP25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 CDC23Q9UJX2 597 aa25.52■■□□□ 1.68
CLPTM1-201ENST00000337392 TULP1O00294 542 aaPredicted RBP25.51■■□□□ 1.68
CLPTM1-201ENST00000337392 MYH10P35580 1976 aa25.51■■□□□ 1.68
CLPTM1-201ENST00000337392 RSRC2Q7L4I2 434 aaKnown RBP25.51■■□□□ 1.68
CLPTM1-201ENST00000337392 CACNA2D4Q7Z3S7 1137 aa25.51■■□□□ 1.68
CLPTM1-201ENST00000337392 PSMB7Q99436 277 aa25.51■■□□□ 1.68
CLPTM1-201ENST00000337392 NUP58Q9BVL2 599 aa25.51■■□□□ 1.68
CLPTM1-201ENST00000337392 ZNF185O15231 689 aa25.51■■□□□ 1.67
CLPTM1-201ENST00000337392 RHOXF2BP0C7M4 288 aa25.51■■□□□ 1.67
CLPTM1-201ENST00000337392 CHMP4BP1P59074 171 aa25.51■■□□□ 1.67
CLPTM1-201ENST00000337392 RHOXF2Q9BQY4 288 aa25.51■■□□□ 1.67
CLPTM1-201ENST00000337392 HACL1Q9UJ83 578 aa25.51■■□□□ 1.67
CLPTM1-201ENST00000337392 PLAGL2Q9UPG8 496 aa25.51■■□□□ 1.67
CLPTM1-201ENST00000337392 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.51■■□□□ 1.67
CLPTM1-201ENST00000337392 PRKG1Q13976 671 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 DCAF17Q5H9S7 520 aaPredicted RBP25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 PARD6BQ9BYG5 372 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 TBC1D12O60347 775 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 TLR2O60603 784 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 FLOT1O75955 427 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 AKAP3O75969 853 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 PTGER2P43116 358 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 NOA1Q8NC60 698 aaKnown RBP25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 SALL4Q9UJQ4 1053 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 MRPL11Q9Y3B7 192 aaKnown RBP25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 FER1L6Q2WGJ9 1857 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 EIF2AK2P19525 551 aaKnown RBP25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 KIF11P52732 1056 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 TRIM59Q8IWR1 403 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 NEK11Q8NG66 645 aa25.5■■□□□ 1.67
CLPTM1-201ENST00000337392 TDRD12Q587J7 1177 aaKnown RBP25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 MYCT1Q8N699 235 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 RETREG2Q8NC44 543 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 MTMR14Q8NCE2 650 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 DEF6Q9H4E7 631 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 FEM1BQ9UK73 627 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 PCDHB13Q9Y5F0 798 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 CAPN6Q9Y6Q1 641 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 IPO5O00410 1097 aaKnown RBP25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 SORBS3O60504 671 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 PNMA6AP0CW24 399 aaPredicted RBP25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 SLC9A1P19634 815 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 TCERG1LQ5VWI1 586 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 CLEC4DQ8WXI8 215 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 DEFB129Q9H1M3 183 aa25.49■■□□□ 1.67
CLPTM1-201ENST00000337392 ASTN1O14525 1302 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 TBCAO75347 108 aaKnown RBP25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 CYLC1P35663 651 aaPredicted RBP25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 KCNH2Q12809 1159 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 SPP2Q13103 211 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 KNOP1Q1ED39 458 aaKnown RBP25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 SLC5A5Q92911 643 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 PNKPQ96T60 521 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 PEX10O60683 326 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 FGFR1OPO95684 399 aaKnown RBP25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 AMPD2Q01433 879 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 R3HDM1Q15032 1099 aaKnown RBP25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 SRGAP1Q7Z6B7 1085 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 LXNQ9BS40 222 aa25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 CNOT7Q9UIV1 285 aaKnown RBP25.48■■□□□ 1.67
CLPTM1-201ENST00000337392 PITPNM2Q9BZ72 1349 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 AKR1B10O60218 316 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 EYA4O95677 639 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 FKBP1CQ5VVH2 108 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 GJB7Q6PEY0 223 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 HAUS4Q9H6D7 363 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 KCNH7Q9NS40 1196 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 RIPK3Q9Y572 518 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 A0A1W2PQJ5 194 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 TISP43B9A030 160 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 MOCS3O95396 460 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 VCAM1P19320 739 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 POLR3CQ9BUI4 534 aaPredicted RBP25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 IFIH1Q9BYX4 1025 aaKnown RBP25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 SUGCTQ9HAC7 445 aa25.47■■□□□ 1.67
CLPTM1-201ENST00000337392 KIF13BQ9NQT8 1826 aa25.46■■□□□ 1.67
CLPTM1-201ENST00000337392 EIF3CLB5ME19 914 aaKnown RBP25.46■■□□□ 1.67
CLPTM1-201ENST00000337392 FIGNQ5HY92 759 aa25.46■■□□□ 1.67
CLPTM1-201ENST00000337392 HGSNATQ68CP4 663 aa25.46■■□□□ 1.67
CLPTM1-201ENST00000337392 EPM2AIP1Q7L775 607 aaPredicted RBP25.46■■□□□ 1.67
CLPTM1-201ENST00000337392 FAM133AQ8N9E0 248 aa25.46■■□□□ 1.67
CLPTM1-201ENST00000337392 TAAR1Q96RJ0 339 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms