RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 HAUS1Q96CS2 278 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 USP21Q9UK80 565 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 PPRC1Q5VV67 1664 aaKnown RBP14.34□□□□□ -0.11
COL2A1-201ENST00000337299 CRB1P82279 1406 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 WDR17Q8IZU2 1322 aa14.34□□□□□ -0.11
COL2A1-201ENST00000337299 I3L4J1 428 aa14.33□□□□□ -0.11
COL2A1-201ENST00000337299 UPP2O95045 317 aa14.33□□□□□ -0.11
COL2A1-201ENST00000337299 ESRRAP11474 423 aaPredicted RBP14.33□□□□□ -0.11
COL2A1-201ENST00000337299 EAPPQ56P03 285 aaPredicted RBP14.33□□□□□ -0.11
COL2A1-201ENST00000337299 SPATA21Q7Z572 469 aa14.33□□□□□ -0.11
COL2A1-201ENST00000337299 NEK8Q86SG6 692 aa14.33□□□□□ -0.11
COL2A1-201ENST00000337299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.33□□□□□ -0.111e-6■■■■■ 29.5
COL2A1-201ENST00000337299 PKD2L1Q9P0L9 805 aa14.33□□□□□ -0.11
COL2A1-201ENST00000337299 CLIC2O15247 247 aa14.33□□□□□ -0.12
COL2A1-201ENST00000337299 CALUO43852 315 aaPredicted RBP14.33□□□□□ -0.12
COL2A1-201ENST00000337299 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
COL2A1-201ENST00000337299 USP15Q9Y4E8 981 aaPredicted RBP14.33□□□□□ -0.12
COL2A1-201ENST00000337299 UBOX5O94941 541 aa14.33□□□□□ -0.12
COL2A1-201ENST00000337299 TRAF1Q13077 416 aa14.33□□□□□ -0.12
COL2A1-201ENST00000337299 PPP1R21Q6ZMI0 780 aa14.33□□□□□ -0.12
COL2A1-201ENST00000337299 UBTFL6P0CB48 400 aaPredicted RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 SRGNP10124 158 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 KLRC1P26715 233 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 LRRC36Q1X8D7 754 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 MYCT1Q8N699 235 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 SUPT20HQ8NEM7 779 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 SNRNP27Q8WVK2 155 aaKnown RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 ZFATQ9P243 1243 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 LEMD3Q9Y2U8 911 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 LOC102724428A0A0B4J2F2 783 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 KCNA3P22001 575 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 PAPOLAP51003 745 aaKnown RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 SIK1P57059 783 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 KAZNQ674X7 775 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 TMEM139Q8IV31 216 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.32□□□□□ -0.126e-7■■■□□ 14.7
COL2A1-201ENST00000337299 FAM53CQ9NYF3 392 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 LGR5O75473 907 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 GNA14O95837 355 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 TRAPPC10P48553 1259 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 CCNHP51946 323 aaPredicted RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 BYSLQ13895 437 aaKnown RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 PDCD2Q16342 344 aaPredicted RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 GRAMD1BQ3KR37 738 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 ARMC3Q5W041 872 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 GPR108Q9NPR9 543 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 HDAC9Q9UKV0 1011 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 C15orf41Q9Y2V0 281 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 RASA4BC9J798 803 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 RASA4O43374 803 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 SPAG7O75391 227 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 CDC37Q16543 378 aaPredicted RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 ACCSLQ4AC99 568 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 SGO2Q562F6 1265 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 CCDC110Q8TBZ0 833 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 AENQ8WTP8 325 aaKnown RBP14.32□□□□□ -0.12
COL2A1-201ENST00000337299 DNAJC9Q8WXX5 260 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 CPVLQ9H3G5 476 aa14.32□□□□□ -0.12
COL2A1-201ENST00000337299 CFAP69A5D8W1 941 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 ECEL1O95672 775 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 CPP00450 1065 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 NQO1P15559 274 aaKnown RBP14.31□□□□□ -0.12
COL2A1-201ENST00000337299 DESP17661 470 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 GYG1P46976 350 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 DYNLL1P63167 89 aaKnown RBP14.31□□□□□ -0.12
COL2A1-201ENST00000337299 DYNC1I2Q13409 638 aaKnown RBP14.31□□□□□ -0.12
COL2A1-201ENST00000337299 FAM43BQ6ZT52 329 aaPredicted RBP14.31□□□□□ -0.12
COL2A1-201ENST00000337299 ADSSL1Q8N142 457 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 CENPKQ9BS16 269 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 PCDHA12Q9UN75 941 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 KIAA1024Q9UPX6 916 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 EXOC1LA0A1B0GW35 172 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 KLRF2D3W0D1 207 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 LDHCP07864 332 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 PLCG2P16885 1265 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 ATF7P17544 494 aaPredicted RBP14.31□□□□□ -0.12
COL2A1-201ENST00000337299 CYP4A11Q02928 519 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 STK4Q13043 487 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 LONRF1Q17RB8 773 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 ZC3H12CQ9C0D7 883 aaKnown RBP14.31□□□□□ -0.12
COL2A1-201ENST00000337299 SPATA31A3Q5VYP0 1347 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 DNAAF5Q86Y56 855 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 ST13P4Q8IZP2 240 aaPredicted RBP14.31□□□□□ -0.12
COL2A1-201ENST00000337299 ANAPC5Q9UJX4 755 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 ARL2BPQ9Y2Y0 163 aa14.31□□□□□ -0.12
COL2A1-201ENST00000337299 CASQ2O14958 399 aaPredicted RBP14.3□□□□□ -0.12
COL2A1-201ENST00000337299 PRPF3O43395 683 aaKnown RBP14.3□□□□□ -0.12
COL2A1-201ENST00000337299 CDR2Q01850 454 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 NAF1Q96HR8 494 aaKnown RBP14.3□□□□□ -0.12
COL2A1-201ENST00000337299 TMOD4Q9NZQ9 345 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 BAZ2BQ9UIF8 2168 aaKnown RBP14.3□□□□□ -0.12
COL2A1-201ENST00000337299 NOL3O60936 208 aaKnown RBP14.3□□□□□ -0.12
COL2A1-201ENST00000337299 B4GALNT2Q8NHY0 566 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 DNM3Q9UQ16 869 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 ZNF148Q9UQR1 794 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 PDE8BO95263 885 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 MAP3K14Q99558 947 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms