RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 CXCL10P02778 98 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 INSRRP14616 1297 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 USP11P51784 963 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 RABGGTBP53611 331 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 MBTPS1Q14703 1052 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 GPNMBQ14956 572 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 ME3Q16798 604 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 MIS18BP1Q6P0N0 1132 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 TAF2Q6P1X5 1199 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 CNKSR3Q6P9H4 555 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 TRAF7Q6Q0C0 670 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 PLPPR4Q7Z2D5 763 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 RSPH3Q86UC2 560 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 TET1Q8NFU7 2136 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 GTF3C6Q969F1 213 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 CDX2Q99626 313 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-203ENST00000336520 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
MRPL55-203ENST00000336520 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 RRN3P2A6NIE6 340 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 DHX15O43143 795 aaKnown RBP12.86□□□□□ -0.35
MRPL55-203ENST00000336520 LARGE1O95461 756 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 SLC26A2P50443 739 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 ADAM17P78536 824 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 KRT76Q01546 638 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 IKBKEQ14164 716 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 PLCB4Q15147 1175 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
MRPL55-203ENST00000336520 ZNF746Q6NUN9 644 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-203ENST00000336520 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 CKAP2LQ8IYA6 745 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 SLC28A3Q9HAS3 691 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
MRPL55-203ENST00000336520 SAMM50Q9Y512 469 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
MRPL55-203ENST00000336520 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 MSH4O15457 936 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 GAS7O60861 476 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 EFCAB14O75071 495 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 ATG7O95352 703 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 PSAPP07602 524 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 WDR5P61964 334 aaKnown RBP12.85□□□□□ -0.35
MRPL55-203ENST00000336520 GRIN2CQ14957 1233 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 NPY5RQ15761 445 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 INF2Q27J81 1249 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 PPP2R2DQ66LE6 453 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 SWSAP1Q6NVH7 229 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 ABHD15Q6UXT9 468 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 HERC6Q8IVU3 1022 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 CCDC60Q8IWA6 550 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-203ENST00000336520 SMAP1Q8IYB5 467 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-203ENST00000336520 PHOSPHO2Q8TCD6 241 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 TRAPPC12Q8WVT3 735 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 SEPT8Q92599 483 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 LENG9Q96B70 501 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 FAM49AQ9H0Q0 323 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-203ENST00000336520 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
MRPL55-203ENST00000336520 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 MBLAC1A4D2B0 266 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-203ENST00000336520 WDR64B1ANS9 1081 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 M0R2N6 131 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 CHMP2AO43633 222 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 TDP2O95551 362 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 RPLP2P05387 115 aaKnown RBP12.84□□□□□ -0.35
MRPL55-203ENST00000336520 MYOGP15173 224 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 FOSL2P15408 326 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 FOSBP53539 338 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 MARCH8Q5T0T0 291 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 LRCH2Q5VUJ6 765 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 NSUN7Q8NE18 718 aaKnown RBP12.84□□□□□ -0.35
MRPL55-203ENST00000336520 DBF4BQ8NFT6 615 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 RIT2Q99578 217 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 TEKT3Q9BXF9 490 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 LIMCH1Q9UPQ0 1083 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 PCDHA10Q9Y5I2 948 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 CHD9Q3L8U1 2897 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 GBF1Q92538 1859 aa12.84□□□□□ -0.35
MRPL55-203ENST00000336520 M0QZ92 97 aa12.83□□□□□ -0.36
MRPL55-203ENST00000336520 EDIL3O43854 480 aa12.83□□□□□ -0.36
MRPL55-203ENST00000336520 TLL1O43897 1013 aa12.83□□□□□ -0.36
MRPL55-203ENST00000336520 HBP1O60381 514 aa12.83□□□□□ -0.36
MRPL55-203ENST00000336520 JAK2O60674 1132 aa12.83□□□□□ -0.36
MRPL55-203ENST00000336520 CA3P07451 260 aa12.83□□□□□ -0.36
MRPL55-203ENST00000336520 FDPSP14324 419 aaKnown RBP12.83□□□□□ -0.36
MRPL55-203ENST00000336520 DEFB103AP81534 67 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms