RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 ARHGAP4P98171 946 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 ITGB3BPQ13352 177 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-201ENST00000334731 TOB2Q14106 344 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-201ENST00000334731 IKBKEQ14164 716 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-201ENST00000334731 CRYGNQ8WXF5 182 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 GLG1Q92896 1179 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 PCYT2Q99447 389 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 OSBPL7Q9BZF2 842 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 SMARCAD1Q9H4L7 1026 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 AGO4Q9HCK5 861 aaKnown RBP12.8□□□□□ -0.36
C9orf85-201ENST00000334731 JPH1Q9HDC5 661 aaPredicted RBP12.8□□□□□ -0.36
C9orf85-201ENST00000334731 ERAP1Q9NZ08 941 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 SLC9A2Q9UBY0 812 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 NFASCO94856 1347 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 EMSYQ7Z589 1322 aa12.8□□□□□ -0.36
C9orf85-201ENST00000334731 FAM86B1E9PN63 330 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 CYP3A4P08684 503 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 FAM86B2P0C5J1 330 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 IFNAR1P17181 557 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 MARK3P27448 753 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 ZNF76P36508 570 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 ACTR2P61160 394 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
C9orf85-201ENST00000334731 TAP1Q03518 808 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 NIPA1Q7RTP0 329 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 USP38Q8NB14 1042 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 SDF4Q9BRK5 362 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
C9orf85-201ENST00000334731 TM6SF1Q9BZW5 370 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 NCOA5Q9HCD5 579 aaKnown RBP12.79□□□□□ -0.36
C9orf85-201ENST00000334731 C6orf50Q9HD87 102 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
C9orf85-201ENST00000334731 CHD9Q3L8U1 2897 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 MYH7BA7E2Y1 1941 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 SCN5AQ14524 2016 aa12.79□□□□□ -0.36
C9orf85-201ENST00000334731 TLL1O43897 1013 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 EFCAB14O75071 495 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 ARHGEF15O94989 841 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 ATG7O95352 703 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 CTSHP09668 335 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 IGFBP4P22692 258 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 GNA11P29992 359 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 AKAP17AQ02040 695 aaKnown RBP12.78□□□□□ -0.36
C9orf85-201ENST00000334731 PPFIA1Q13136 1202 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 GRIK4Q16099 956 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 PLEKHG4Q58EX7 1191 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 FAM26DQ5JW98 314 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 MARCH8Q5T0T0 291 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
C9orf85-201ENST00000334731 RUFY4Q6ZNE9 571 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 RPAINQ86UA6 219 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
C9orf85-201ENST00000334731 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
C9orf85-201ENST00000334731 SLC26A6Q9BXS9 759 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
C9orf85-201ENST00000334731 CERS4Q9HA82 394 aa12.78□□□□□ -0.36
C9orf85-201ENST00000334731 IGLV3-22A0A075B6J6 115 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 MBLAC1A4D2B0 266 aaPredicted RBP12.77□□□□□ -0.37
C9orf85-201ENST00000334731 RFXAPO00287 272 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 DHX15O43143 795 aaKnown RBP12.77□□□□□ -0.37
C9orf85-201ENST00000334731 GJB5O95377 273 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 CCNE2O96020 404 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 CHRNA1P02708 482 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 INSRRP14616 1297 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
C9orf85-201ENST00000334731 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 PLA2G4DQ86XP0 818 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 REXO1Q8N1G1 1221 aaKnown RBP12.77□□□□□ -0.37
C9orf85-201ENST00000334731 PPM1EQ8WY54 764 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 SEPT8Q92599 483 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 ZNF274Q96GC6 653 aaPredicted RBP12.77□□□□□ -0.37
C9orf85-201ENST00000334731 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 AZI2Q9H6S1 392 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 TET1Q8NFU7 2136 aa12.77□□□□□ -0.37
C9orf85-201ENST00000334731 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 A0A0C4DFX4 3053 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 IGKV6D-21A0A0A0MT36 114 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 LCHNA4D1U4 455 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 EPOPA6NHQ4 379 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 RRN3P2A6NIE6 340 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 STAT5BP51692 787 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 PLCB4Q15147 1175 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 CCDC85BQ15834 202 aaPredicted RBP12.76□□□□□ -0.37
C9orf85-201ENST00000334731 SPRED2Q7Z698 418 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 BICD2Q8TD16 824 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 RASGRP4Q8TDF6 673 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 RAD9AQ99638 391 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 SH3GLB2Q9NR46 395 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 VPS54Q9P1Q0 977 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
C9orf85-201ENST00000334731 DDX39AO00148 427 aaKnown RBP12.75□□□□□ -0.37
C9orf85-201ENST00000334731 IPO5O00410 1097 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms