RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SLC43A3Q8NBI5 491 aa29.21■■■□□ 2.27
SMDT1-201ENST00000331479 AFAP1L1Q8TED9 768 aa29.21■■■□□ 2.27
SMDT1-201ENST00000331479 ZNF215Q9UL58 517 aaPredicted RBP29.21■■■□□ 2.27
SMDT1-201ENST00000331479 WDR81Q562E7 1941 aa29.21■■■□□ 2.27
SMDT1-201ENST00000331479 ARVCFO00192 962 aa29.2■■■□□ 2.26
SMDT1-201ENST00000331479 FXR2P51116 673 aaKnown RBP eCLIP29.2■■■□□ 2.26
SMDT1-201ENST00000331479 NUCB2P80303 420 aa29.2■■■□□ 2.26
SMDT1-201ENST00000331479 SNX17Q15036 470 aa29.2■■■□□ 2.26
SMDT1-201ENST00000331479 UGCGQ16739 394 aa29.2■■■□□ 2.26
SMDT1-201ENST00000331479 CHAMP1Q96JM3 812 aa29.2■■■□□ 2.26
SMDT1-201ENST00000331479 ERAP1Q9NZ08 941 aa29.2■■■□□ 2.26
SMDT1-201ENST00000331479 CEP131Q9UPN4 1083 aa29.2■■■□□ 2.26
SMDT1-201ENST00000331479 MAFBQ9Y5Q3 323 aaPredicted RBP29.2■■■□□ 2.26
SMDT1-201ENST00000331479 ATP4AP20648 1035 aa29.19■■■□□ 2.26
SMDT1-201ENST00000331479 CDK7P50613 346 aa29.19■■■□□ 2.26
SMDT1-201ENST00000331479 FAM160B1Q5W0V3 765 aa29.19■■■□□ 2.26
SMDT1-201ENST00000331479 DTHD1Q6ZMT9 781 aa29.19■■■□□ 2.26
SMDT1-201ENST00000331479 ZNF396Q96N95 335 aaPredicted RBP29.19■■■□□ 2.26
SMDT1-201ENST00000331479 IPO9Q96P70 1041 aaKnown RBP29.19■■■□□ 2.26
SMDT1-201ENST00000331479 BMP15O95972 392 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 DNM1Q05193 864 aaKnown RBP29.18■■■□□ 2.26
SMDT1-201ENST00000331479 EPHA7Q15375 998 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 PDXDC2PQ6P474 469 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 BANK1Q8NDB2 785 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 IGSF9BQ9UPX0 1349 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 ZNF862O60290 1169 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 NASPP49321 788 aaPredicted RBP29.18■■■□□ 2.26
SMDT1-201ENST00000331479 TMEM266Q2M3C6 531 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 TRIM60Q495X7 471 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 C1orf53Q5VUE5 145 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 ARL6IP4Q66PJ3 421 aaKnown RBP29.18■■■□□ 2.26
SMDT1-201ENST00000331479 RGL1Q9NZL6 768 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 HDAC6Q9UBN7 1215 aa29.18■■■□□ 2.26
SMDT1-201ENST00000331479 PLCB4Q15147 1175 aa29.17■■■□□ 2.26
SMDT1-201ENST00000331479 FAM47CQ5HY64 1035 aa29.17■■■□□ 2.26
SMDT1-201ENST00000331479 NFRKBQ6P4R8 1299 aa29.17■■■□□ 2.26
SMDT1-201ENST00000331479 IGSF22Q8N9C0 903 aa29.17■■■□□ 2.26
SMDT1-201ENST00000331479 EIF2AK1Q9BQI3 630 aaKnown RBP29.17■■■□□ 2.26
SMDT1-201ENST00000331479 ALPK3Q96L96 1907 aa29.16■■■□□ 2.26
SMDT1-201ENST00000331479 VWA3AA6NCI4 1184 aa29.16■■■□□ 2.26
SMDT1-201ENST00000331479 MARCKSP29966 332 aaPredicted RBP29.16■■■□□ 2.26
SMDT1-201ENST00000331479 RGS19P49795 217 aa29.16■■■□□ 2.26
SMDT1-201ENST00000331479 RTP1P59025 263 aa29.16■■■□□ 2.26
SMDT1-201ENST00000331479 HIC1Q14526 733 aa29.16■■■□□ 2.26
SMDT1-201ENST00000331479 C7orf31Q8N865 590 aa29.16■■■□□ 2.26
SMDT1-201ENST00000331479 DYDC2Q96IM9 177 aa29.16■■■□□ 2.26
SMDT1-201ENST00000331479 WRAP73Q9P2S5 460 aaPredicted RBP29.16■■■□□ 2.26
SMDT1-201ENST00000331479 MYH9P35579 1960 aaKnown RBP29.16■■■□□ 2.26
SMDT1-201ENST00000331479 SMIM10L2AP0DMW4 78 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 SMIM10L2BP0DMW5 78 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 SLC26A2P50443 739 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 CYP4A11Q02928 519 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 GRIN1Q05586 938 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 PDIA5Q14554 519 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 SLC39A14Q15043 492 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 TRMT1LQ7Z2T5 733 aaKnown RBP29.15■■■□□ 2.26
SMDT1-201ENST00000331479 LINC00301Q8NCQ3 95 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 HSD17B14Q9BPX1 270 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 CIZ1Q9ULV3 898 aaPredicted RBP29.15■■■□□ 2.26
SMDT1-201ENST00000331479 ATP11BQ9Y2G3 1177 aa29.15■■■□□ 2.26
SMDT1-201ENST00000331479 PP2D1A8MPX8 630 aa29.14■■■□□ 2.26
SMDT1-201ENST00000331479 PQBP1O60828 265 aaKnown RBP29.14■■■□□ 2.26
SMDT1-201ENST00000331479 P4HBP07237 508 aaKnown RBP29.14■■■□□ 2.26
SMDT1-201ENST00000331479 SESTD1Q86VW0 696 aa29.14■■■□□ 2.26
SMDT1-201ENST00000331479 CKAP2LQ8IYA6 745 aa29.14■■■□□ 2.26
SMDT1-201ENST00000331479 LRWD1Q9UFC0 647 aa29.14■■■□□ 2.26
SMDT1-201ENST00000331479 SLITRK3O94933 977 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 QARSP47897 775 aaKnown RBP29.13■■■□□ 2.25
SMDT1-201ENST00000331479 TLE2Q04725 743 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 CTTNQ14247 550 aaKnown RBP29.13■■■□□ 2.25
SMDT1-201ENST00000331479 GDF6Q6KF10 455 aaPredicted RBP29.13■■■□□ 2.25
SMDT1-201ENST00000331479 ANKRD33Q7Z3H0 272 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 ATP6V0A1Q93050 837 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 LXNQ9BS40 222 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 TRMT13Q9NUP7 481 aaKnown RBP29.13■■■□□ 2.25
SMDT1-201ENST00000331479 GTF2IRD1Q9UHL9 959 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 POTEB3A0JP26 581 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 CDC25AP30304 524 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 PSMC5P62195 406 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 ZNF200P98182 395 aaPredicted RBP29.13■■■□□ 2.25
SMDT1-201ENST00000331479 PRKCEQ02156 737 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 STK38Q15208 465 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 ATL3Q6DD88 541 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 POTEBQ6S5H4 581 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 FAM126BQ8IXS8 530 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 ATP8B4Q8TF62 1192 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 HTATIP2Q9BUP3 242 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 TRPV6Q9H1D0 765 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 SETD4Q9NVD3 440 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 FBXO2Q9UK22 296 aaPredicted RBP29.13■■■□□ 2.25
SMDT1-201ENST00000331479 TRPC6Q9Y210 931 aa29.13■■■□□ 2.25
SMDT1-201ENST00000331479 B4GALT4O60513 344 aa29.12■■■□□ 2.25
SMDT1-201ENST00000331479 STBD1O95210 358 aa29.12■■■□□ 2.25
SMDT1-201ENST00000331479 SPATA31C1P0DKV0 1188 aa29.12■■■□□ 2.25
SMDT1-201ENST00000331479 PTPN11Q06124 597 aaPredicted RBP29.12■■■□□ 2.25
SMDT1-201ENST00000331479 SEZ6LQ9BYH1 1024 aa29.12■■■□□ 2.25
SMDT1-201ENST00000331479 RAB34Q9BZG1 259 aa29.12■■■□□ 2.25
SMDT1-201ENST00000331479 ATP6V1DQ9Y5K8 247 aa29.12■■■□□ 2.25
SMDT1-201ENST00000331479 MED24O75448 989 aa29.11■■■□□ 2.25
SMDT1-201ENST00000331479 YEATS4O95619 227 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms