RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CETPP11597 493 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 MYOCDQ8IZQ8 938 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 FAM49AQ9H0Q0 323 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-201ENST00000331163 TELO2Q9Y4R8 837 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 CBFA2T2O43439 604 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 TRPA1O75762 1119 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 URI1O94763 535 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-201ENST00000331163 TMEM62Q0P6H9 643 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 TDRD12Q587J7 1177 aaKnown RBP17.53■□□□□ 0.4
PDGFB-201ENST00000331163 DHX40Q8IX18 779 aaKnown RBP17.53■□□□□ 0.4
PDGFB-201ENST00000331163 TMEM143Q96AN5 459 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 DEF6Q9H4E7 631 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 DNAI1Q9UI46 699 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 PADI6Q6TGC4 694 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 MTRQ99707 1265 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 ANKFY1Q9P2R3 1169 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 ZNF536O15090 1300 aa17.53■□□□□ 0.4
PDGFB-201ENST00000331163 PLIN4Q96Q06 1357 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 B4DLN1 442 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 TEX33O43247 280 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 PPP4R3AQ6IN85 833 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 BTNL9Q6UXG8 535 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 HS2ST1Q7LGA3 356 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 FAM20AQ96MK3 541 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 PNMA5Q96PV4 448 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 REEP2Q9BRK0 252 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 RUSC1Q9BVN2 902 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 PDGFCQ9NRA1 345 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 CYP39A1Q9NYL5 469 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 ZNF214Q9UL59 606 aaPredicted RBP17.52■□□□□ 0.4
PDGFB-201ENST00000331163 KDM3AQ9Y4C1 1321 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 SLC16A4O15374 487 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 SKIDA1Q1XH10 827 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 NAALADL2Q58DX5 795 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 NLRP4Q96MN2 994 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 SPATA33Q96N06 139 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.4
PDGFB-201ENST00000331163 KCNJ18B7U540 433 aa17.52■□□□□ 0.39
PDGFB-201ENST00000331163 SEC31AO94979 1220 aaKnown RBP17.52■□□□□ 0.39
PDGFB-201ENST00000331163 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.39
PDGFB-201ENST00000331163 DPYDQ12882 1025 aa17.52■□□□□ 0.39
PDGFB-201ENST00000331163 KCNJ12Q14500 433 aa17.52■□□□□ 0.39
PDGFB-201ENST00000331163 FKBP15Q5T1M5 1219 aa17.52■□□□□ 0.39
PDGFB-201ENST00000331163 LENG1Q96BZ8 264 aaPredicted RBP17.52■□□□□ 0.39
PDGFB-201ENST00000331163 ERO1AQ96HE7 468 aa17.52■□□□□ 0.39
PDGFB-201ENST00000331163 MMTAG2Q9BU76 263 aaKnown RBP17.52■□□□□ 0.39
PDGFB-201ENST00000331163 JPH1Q9HDC5 661 aaPredicted RBP17.52■□□□□ 0.39
PDGFB-201ENST00000331163 SPDYE5A6NIY4 337 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 CYP2C19P33261 490 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 COASYQ13057 564 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 LRRC71Q8N4P6 559 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 IGSF22Q8N9C0 903 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 ZC3H15Q8WU90 426 aaKnown RBP17.51■□□□□ 0.39
PDGFB-201ENST00000331163 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 UBXN4Q92575 508 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 ELMO3Q96BJ8 720 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 ZSWIM4Q9H7M6 989 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 ZCCHC17Q9NP64 241 aaKnown RBP17.51■□□□□ 0.39
PDGFB-201ENST00000331163 DYNC1LI2O43237 492 aaPredicted RBP17.51■□□□□ 0.39
PDGFB-201ENST00000331163 EXOC3O60645 756 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 ERVK-9P63128 1117 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 ERVK-24P63145 666 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 TRAPPC12Q8WVT3 735 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 CCSER1Q9C0I3 900 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 HNRNPH2P55795 449 aaKnown RBP17.51■□□□□ 0.39
PDGFB-201ENST00000331163 RAPGEF1Q13905 1077 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 NACC1Q96RE7 527 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
PDGFB-201ENST00000331163 ADORA2AP29274 412 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 QARSP47897 775 aaKnown RBP17.5■□□□□ 0.39
PDGFB-201ENST00000331163 GTF2A2P52657 109 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 PMS1P54277 932 aaKnown RBP17.5■□□□□ 0.39
PDGFB-201ENST00000331163 ADAM9Q13443 819 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 ZNF658Q5TYW1 1059 aaPredicted RBP17.5■□□□□ 0.39
PDGFB-201ENST00000331163 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 MTMR9Q96QG7 549 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 LRRC27Q9C0I9 530 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 NAV1Q8NEY1 1877 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 IPO7O95373 1038 aaKnown RBP17.5■□□□□ 0.39
PDGFB-201ENST00000331163 KCNA1Q09470 495 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 BMS1Q14692 1282 aaKnown RBP17.5■□□□□ 0.39
PDGFB-201ENST00000331163 IQCB1Q15051 598 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 BRI3BPQ8WY22 251 aa17.5■□□□□ 0.39
PDGFB-201ENST00000331163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDGFB-201ENST00000331163 WDR64B1ANS9 1081 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 DLATP10515 647 aaKnown RBP17.49■□□□□ 0.39
PDGFB-201ENST00000331163 NR2F2P24468 414 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 GJA5P36382 358 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 GYS2P54840 703 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 MYBP10242 640 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 PRPHP41219 470 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 CCDC155Q8N6L0 562 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 DESI2Q9BSY9 194 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 FBXO40Q9UH90 709 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 A0A1B0GUL6 1792 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 CEP290O15078 2479 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 YY1P25490 414 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms