RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ATP11AP98196 1134 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 FAM43BQ6ZT52 329 aaPredicted RBP26.53■■□□□ 1.84
SOX1-201ENST00000330949 PGM2Q96G03 612 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.53■■□□□ 1.84
SOX1-201ENST00000330949 INTS9Q9NV88 658 aaKnown RBP26.53■■□□□ 1.84
SOX1-201ENST00000330949 ATP6V0A2Q9Y487 856 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 BCORQ6W2J9 1755 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 VIMP08670 466 aaKnown RBP26.52■■□□□ 1.84
SOX1-201ENST00000330949 ATP4AP20648 1035 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 KLHL29Q96CT2 875 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 TSC22D3Q99576 134 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 AP1M1Q9BXS5 423 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 XIRP1Q702N8 1843 aaKnown RBP26.52■■□□□ 1.84
SOX1-201ENST00000330949 MPHOSPH10O00566 681 aaKnown RBP26.52■■□□□ 1.84
SOX1-201ENST00000330949 PPFIA2O75334 1257 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 AMPD3Q01432 767 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 SUSD4Q5VX71 490 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 TBC1D5Q92609 795 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 UTP11Q9Y3A2 253 aaKnown RBP26.52■■□□□ 1.84
SOX1-201ENST00000330949 CYP2D7A0A087X1C5 515 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 KRIT1O00522 736 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 SLC4A8Q2Y0W8 1093 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 NAF1Q96HR8 494 aaKnown RBP26.52■■□□□ 1.84
SOX1-201ENST00000330949 RAB17Q9H0T7 212 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 NLRC4Q9NPP4 1024 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 MYH4Q9Y623 1939 aa26.52■■□□□ 1.84
SOX1-201ENST00000330949 BAZ2BQ9UIF8 2168 aaKnown RBP26.51■■□□□ 1.83
SOX1-201ENST00000330949 BTNL10A8MVZ5 291 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 EVI5O60447 810 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 SLC5A1P13866 664 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 ABL2P42684 1182 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 TAF11Q15544 211 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 SLC5A9Q2M3M2 681 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 CCDC38Q502W7 563 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 APLFQ8IW19 511 aaPredicted RBP26.51■■□□□ 1.83
SOX1-201ENST00000330949 KIAA0895Q8NCT3 520 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 PRCCQ92733 491 aaPredicted RBP26.51■■□□□ 1.83
SOX1-201ENST00000330949 PAPOLBQ9NRJ5 636 aaKnown RBP26.51■■□□□ 1.83
SOX1-201ENST00000330949 NOC2LQ9Y3T9 749 aaKnown RBP26.51■■□□□ 1.83
SOX1-201ENST00000330949 PAPPAQ13219 1627 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 DOCK2Q92608 1830 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 CWF19L1Q69YN2 538 aaKnown RBP26.51■■□□□ 1.83
SOX1-201ENST00000330949 SPICE1Q8N0Z3 855 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 FAM210AQ96ND0 272 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 AMACRQ9UHK6 382 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 ATP8A1Q9Y2Q0 1164 aa26.51■■□□□ 1.83
SOX1-201ENST00000330949 CCDC169A6NNP5 214 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 TLR2O60603 784 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 FLOT1O75955 427 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 PLCG1P19174 1290 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 CTCFP49711 727 aaPredicted RBP26.5■■□□□ 1.83
SOX1-201ENST00000330949 PDE6CP51160 858 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 PFKFB3Q16875 520 aaPredicted RBP26.5■■□□□ 1.83
SOX1-201ENST00000330949 BLIDQ8IZY5 108 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 FMO2Q99518 471 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.5■■□□□ 1.83
SOX1-201ENST00000330949 COL22A1Q8NFW1 1626 aaPredicted RBP26.5■■□□□ 1.83
SOX1-201ENST00000330949 NUDT17P0C025 328 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 COPS2P61201 443 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 ROR2Q01974 943 aaKnown RBP26.5■■□□□ 1.83
SOX1-201ENST00000330949 SF3A3Q12874 501 aaKnown RBP eCLIP26.5■■□□□ 1.83
SOX1-201ENST00000330949 SRBD1Q8N5C6 995 aaKnown RBP26.5■■□□□ 1.83
SOX1-201ENST00000330949 LRRC15Q8TF66 581 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 FAM167BQ9BTA0 163 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 ANAPC4Q9UJX5 808 aa26.5■■□□□ 1.83
SOX1-201ENST00000330949 LAD1O00515 517 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 RTN3O95197 1032 aaPredicted RBP26.49■■□□□ 1.83
SOX1-201ENST00000330949 MSH2P43246 934 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 GALNTL6Q49A17 601 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 ADAM7Q9H2U9 754 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 SNX3O60493 162 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 FAM83BQ5T0W9 1011 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 PRMT1Q99873 361 aaKnown RBP26.49■■□□□ 1.83
SOX1-201ENST00000330949 TANGO6Q9C0B7 1094 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 LRRC4CQ9HCJ2 640 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 ARHGEF3Q9NR81 526 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 TCP11L1Q9NUJ3 509 aa26.49■■□□□ 1.83
SOX1-201ENST00000330949 ABLIM1O14639 778 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 KRT16P08779 473 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 SNX1Q13596 522 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 A0A087X0T9 212 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 FAM228BP0C875 321 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 ADGRA1Q86SQ6 560 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 CABP7Q86V35 215 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 AK8Q96MA6 479 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 TXLNGYQ9BZA5 131 aa26.48■■□□□ 1.83
SOX1-201ENST00000330949 SMIM24O75264 130 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 LRRC63Q05C16 580 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 BNIP1Q12981 228 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 TMEM60Q9H2L4 133 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 ADAM22Q9P0K1 906 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 USP15Q9Y4E8 981 aaPredicted RBP26.47■■□□□ 1.83
SOX1-201ENST00000330949 TTI1O43156 1089 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 C10orf76Q5T2E6 689 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 CROCCP2Q86T23 111 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 PROCA1Q8NCQ7 364 aaPredicted RBP26.47■■□□□ 1.83
SOX1-201ENST00000330949 PACSIN1Q9BY11 444 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 CCDC194A0A1B0GVG4 234 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 WFS1O76024 890 aa26.47■■□□□ 1.83
SOX1-201ENST00000330949 PDE6BP35913 854 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms