RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CCDC51Q96ER9 411 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 PRIMPOLQ96LW4 560 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 LXNQ9BS40 222 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 TRIM14Q14142 442 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 TOGARAM2Q6ZUX3 1019 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 USP50Q70EL3 339 aaPredicted RBP18.79■□□□□ 0.6
DDX41-201ENST00000330503 MOB2Q70IA6 237 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 CDCA5Q96FF9 252 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 PTPRFP10586 1907 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 NR3C2P08235 984 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 EPHX2P34913 555 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 FKBP3Q00688 224 aaKnown RBP18.78■□□□□ 0.6
DDX41-201ENST00000330503 MTF1Q14872 753 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 XRRA1Q6P2D8 792 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 ZC3H3Q8IXZ2 948 aaKnown RBP18.78■□□□□ 0.6
DDX41-201ENST00000330503 CLMNQ96JQ2 1002 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 ELP3Q9H9T3 547 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 TBC1D22BQ9NU19 505 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 CYP39A1Q9NYL5 469 aa18.78■□□□□ 0.6
DDX41-201ENST00000330503 TTC26A0AVF1 554 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 SFI1A8K8P3 1242 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 TRAF5O00463 557 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 P4HBP07237 508 aaKnown RBP18.77■□□□□ 0.6
DDX41-201ENST00000330503 MYBP10242 640 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 IREB2P48200 963 aaKnown RBP18.77■□□□□ 0.6
DDX41-201ENST00000330503 KLK7P49862 253 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 VWA3BQ502W6 1294 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 RAD9BQ6WBX8 426 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 NEK9Q8TD19 979 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 NAA15Q9BXJ9 866 aaKnown RBP18.77■□□□□ 0.6
DDX41-201ENST00000330503 A1CFQ9NQ94 594 aaKnown RBP18.77■□□□□ 0.6
DDX41-201ENST00000330503 PPP2R2CQ9Y2T4 447 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 COL4A3BPQ9Y5P4 624 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 SOWAHDA6NJG2 315 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 PEX10O60683 326 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 KIF20AO95235 890 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 TPM2P07951 284 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 TPM1P09493 284 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 CCND2P30279 289 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 PLS1Q14651 629 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 SYCP1Q15431 976 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 ZC3H15Q8WU90 426 aaKnown RBP18.77■□□□□ 0.6
DDX41-201ENST00000330503 ERGIC2Q96RQ1 377 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 ACAD9Q9H845 621 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 ABHD10Q9NUJ1 306 aa18.77■□□□□ 0.6
DDX41-201ENST00000330503 GAP43P17677 238 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 KRT9P35527 623 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 MAN2A1Q16706 1144 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 CEP63Q96MT8 703 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 TTYH3Q9C0H2 523 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 NDST4Q9H3R1 872 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 CAPN11Q9UMQ6 739 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 IRF6O14896 467 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 CCP110O43303 1012 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 TBCAO75347 108 aaKnown RBP18.76■□□□□ 0.59
DDX41-201ENST00000330503 PRPF6O94906 941 aaKnown RBP18.76■□□□□ 0.59
DDX41-201ENST00000330503 PPATQ06203 517 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 BMT2Q1RMZ1 405 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 LBX2Q6XYB7 198 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 MYRIPQ8NFW9 859 aa18.76■□□□□ 0.59
DDX41-201ENST00000330503 NSUN6Q8TEA1 469 aaKnown RBP18.76■□□□□ 0.59
DDX41-201ENST00000330503 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
DDX41-201ENST00000330503 RGS20O76081 388 aa18.75■□□□□ 0.59
DDX41-201ENST00000330503 CCNE2O96020 404 aa18.75■□□□□ 0.59
DDX41-201ENST00000330503 KNOP1Q1ED39 458 aaKnown RBP18.75■□□□□ 0.59
DDX41-201ENST00000330503 MAF1Q9H063 256 aa18.75■□□□□ 0.59
DDX41-201ENST00000330503 ZSWIM4Q9H7M6 989 aa18.75■□□□□ 0.59
DDX41-201ENST00000330503 MRPL44Q9H9J2 332 aaKnown RBP18.75■□□□□ 0.59
DDX41-201ENST00000330503 OLFML3Q9NRN5 406 aa18.75■□□□□ 0.59
DDX41-201ENST00000330503 BTBD7Q9P203 1132 aa18.75■□□□□ 0.59
DDX41-201ENST00000330503 A0A0G2JLL6 359 aaPredicted RBP18.74■□□□□ 0.59
DDX41-201ENST00000330503 ZSCAN12O43309 604 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 FAM13AO94988 1023 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 ZNF131P52739 623 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 ERVK-24P63145 666 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 EDRF1Q3B7T1 1238 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 GADL1Q6ZQY3 521 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 PRRT2Q7Z6L0 340 aaPredicted RBP18.74■□□□□ 0.59
DDX41-201ENST00000330503 ERO1BQ86YB8 467 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 GPRASP2Q96D09 838 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 OTUD5Q96G74 571 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 INPP4AQ96PE3 977 aaPredicted RBP18.74■□□□□ 0.59
DDX41-201ENST00000330503 FIZ1Q96SL8 496 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 KCND2Q9NZV8 630 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 TRAF3IP3Q9Y228 551 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 SIK3Q9Y2K2 1263 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 UQCRHLA0A096LP55 91 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 RIOK3O14730 519 aaKnown RBP18.74■□□□□ 0.59
DDX41-201ENST00000330503 LYPLA2O95372 231 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 UQCRHP07919 91 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
DDX41-201ENST00000330503 ADAM9Q13443 819 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 ANKRD13AQ8IZ07 590 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 MYCT1Q8N699 235 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 ZNF592Q92610 1267 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 DNAJC7Q99615 494 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 DESI2Q9BSY9 194 aa18.74■□□□□ 0.59
DDX41-201ENST00000330503 LUC7L2Q9Y383 392 aaKnown RBP18.74■□□□□ 0.59
DDX41-201ENST00000330503 ARHGEF35A5YM69 484 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms