RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PRR5-ARHGAP8B1AHC4 643 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 FGF18O76093 207 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 GGPS1O95749 300 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 LGALS2P05162 132 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 SP9P0CG40 484 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 GNAT2P19087 354 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 MTHFRP42898 656 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 ARHGAP8P85298 464 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 USH1GQ495M9 461 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 PLPP4Q5VZY2 271 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 TBC1D5Q92609 795 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 KIF1BPQ96EK5 621 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 RTKNQ9BST9 563 aa17.29■□□□□ 0.36
CTHRC1-201ENST00000330295 GPAA1O43292 621 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 STAG3L1P0CL83 205 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 EIF2AK2P19525 551 aaKnown RBP17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 GATMP50440 423 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 ADAM17P78536 824 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 MGAT3Q09327 533 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 ARHGEF16Q5VV41 709 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 IFNL3Q8IZI9 196 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 CASP10Q92851 521 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 AAASQ9NRG9 546 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 TMEM260Q9NX78 707 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 NCDNQ9UBB6 729 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 USTQ9Y2C2 406 aa17.28■□□□□ 0.36
CTHRC1-201ENST00000330295 NR3C2P08235 984 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 RLBP1P12271 317 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 NOVP48745 357 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 ARHGAP4P98171 946 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 LMNB2Q03252 620 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 FBXO47Q5MNV8 452 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 VARS2Q5ST30 1063 aaKnown RBP17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 SPOUT1Q5T280 376 aaKnown RBP17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 TSHZ1Q6ZSZ6 1077 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 RTN4RL1Q86UN2 441 aaPredicted RBP17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 PANK1Q8TE04 598 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 APPBP2Q92624 585 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 DUSP12Q9UNI6 340 aa17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
CTHRC1-201ENST00000330295 CCDC171Q6TFL3 1326 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 STK25O00506 426 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 WEE2P0C1S8 567 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 UBA1P22314 1058 aaKnown RBP17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 PPARAQ07869 468 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 DMWDQ09019 674 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 APOBRQ0VD83 1088 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 TDGQ13569 410 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 COL9A3Q14050 684 aaPredicted RBP17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 KCNV1Q6PIU1 500 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 THNSL1Q8IYQ7 743 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 LMBR1Q8WVP7 490 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 TCF25Q9BQ70 676 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 CYP26B1Q9NR63 512 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
CTHRC1-201ENST00000330295 HIDE1A8MVS5 230 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 KINO60870 393 aaKnown RBP17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 EOMESO95936 686 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 SP2Q02086 613 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 TBC1D8BQ0IIM8 1120 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 FTHL17Q9BXU8 183 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 AGO3Q9H9G7 860 aaKnown RBP17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 MLXIPQ9HAP2 919 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 ENTPD7Q9NQZ7 604 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 PXMP2Q9NR77 195 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 LZTS1Q9Y250 596 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 HCFC2Q9Y5Z7 792 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 ZFYVE26Q68DK2 2539 aa17.25■□□□□ 0.35
CTHRC1-201ENST00000330295 CACNA1IQ9P0X4 2223 aa17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 SCG2P13521 617 aa17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 RFX1P22670 979 aa17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 CD52P31358 61 aa17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 KIAA1841Q6NSI8 718 aa17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 TAF2Q6P1X5 1199 aa17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 RUFY4Q6ZNE9 571 aa17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 FNDC1Q4ZHG4 1894 aaPredicted RBP17.24■□□□□ 0.35
CTHRC1-201ENST00000330295 TGFB3P10600 412 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 PDHBP11177 359 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 TOP1P11387 765 aaKnown RBP17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 PPM1JQ5JR12 505 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 RSPH3Q86UC2 560 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 MCF2L2Q86YR7 1114 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 C1orf210Q8IVY1 113 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 COLGALT1Q8NBJ5 622 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 TMEM47Q9BQJ4 181 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 LRFN2Q9ULH4 789 aa17.23■□□□□ 0.35
CTHRC1-201ENST00000330295 ABCB11O95342 1321 aa17.22■□□□□ 0.35
CTHRC1-201ENST00000330295 DENND4AQ7Z401 1863 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms