RNA–Protein interactions for RNA: ENST00000323699.8

DEGS1-201, Transcript of delta 4-desaturase, sphingolipid 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEGS1, Length 2,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEGS1-201ENST00000323699 RAD51CO43502 376 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 ZEB2O60315 1214 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 MED24O75448 989 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 SLC16A2P36021 539 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 DNA2P51530 1060 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
DEGS1-201ENST00000323699 PTK2Q05397 1052 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 SH2D3CQ8N5H7 860 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 DDX4Q9NQI0 724 aaKnown RBP17.05■□□□□ 0.32
DEGS1-201ENST00000323699 HDAC9Q9UKV0 1011 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 ATP8B3O60423 1300 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 NR2F2P24468 414 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 SHMT1P34896 483 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 HSPA9P38646 679 aaKnown RBP17.05■□□□□ 0.32
DEGS1-201ENST00000323699 PDCLQ13371 301 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 RPS6KA1Q15418 735 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 KCTD16Q68DU8 428 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
DEGS1-201ENST00000323699 ZNF571Q7Z3V5 609 aaPredicted RBP17.05■□□□□ 0.32
DEGS1-201ENST00000323699 TAF4BQ92750 862 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
DEGS1-201ENST00000323699 PBKQ96KB5 322 aa17.05■□□□□ 0.32
DEGS1-201ENST00000323699 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
DEGS1-201ENST00000323699 LTBP1Q14766 1721 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 BBOX1O75936 387 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 KIF4AO95239 1232 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 GUCY2FP51841 1108 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 VPS72Q15906 364 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 MOXD1Q6UVY6 613 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 SLFN12Q8IYM2 578 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 ACTRT1Q8TDG2 376 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 SCFD2Q8WU76 684 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 ISCUQ9H1K1 167 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
DEGS1-201ENST00000323699 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
DEGS1-201ENST00000323699 ATXN2Q99700 1313 aaKnown RBP17.04■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 BHMG1C9JSJ3 638 aaPredicted RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 KRT18P05783 430 aaKnown RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 ACTN1P12814 892 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 UCHL3P15374 230 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 PRKCIP41743 596 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 IFI16Q16666 785 aaKnown RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 KCTD1Q719H9 257 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 EPM2AIP1Q7L775 607 aaPredicted RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 LRRC57Q8N9N7 239 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 RNPC3Q96LT9 517 aaKnown RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 ARMCX3Q9UH62 379 aaPredicted RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 NAGPAQ9UK23 515 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 AFPP02771 609 aaKnown RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 ZBTB48P10074 688 aaPredicted RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 SLC9A1P19634 815 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 PON1P27169 355 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 ANXA13P27216 316 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 CASP5P51878 434 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 GTF2IP78347 998 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 GIT2Q14161 759 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 TRADDQ15628 312 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 ENOX2Q16206 610 aaKnown RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 KNOP1Q1ED39 458 aaKnown RBP17.03■□□□□ 0.32
DEGS1-201ENST00000323699 B4GALNT4Q76KP1 1039 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 ATP6V1G3Q96LB4 118 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 ANO3Q9BYT9 981 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 NENFQ9UMX5 172 aa17.03■□□□□ 0.32
DEGS1-201ENST00000323699 POTEFA5A3E0 1075 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 HMGB1P1B2RPK0 211 aaPredicted RBP17.02■□□□□ 0.32
DEGS1-201ENST00000323699 KCNK3O14649 394 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 POTEIP0CG38 1075 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 ATP1A2P50993 1020 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 MEX3CQ5U5Q3 659 aaKnown RBP17.02■□□□□ 0.32
DEGS1-201ENST00000323699 POTEGQ6S5H5 508 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 CATSPER3Q86XQ3 398 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 MICALL1Q8N3F8 863 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 CRYGNQ8WXF5 182 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 CALR3Q96L12 384 aaKnown RBP17.02■□□□□ 0.32
DEGS1-201ENST00000323699 SPAG5Q96R06 1193 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 RABEP2Q9H5N1 569 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 FBXL5Q9UKA1 691 aa17.02■□□□□ 0.32
DEGS1-201ENST00000323699 PDXKO00764 312 aa17.02■□□□□ 0.31
DEGS1-201ENST00000323699 NDUFAB1O14561 156 aa17.02■□□□□ 0.31
DEGS1-201ENST00000323699 NR1D1P20393 614 aa17.02■□□□□ 0.31
DEGS1-201ENST00000323699 ECHS1P30084 290 aa17.02■□□□□ 0.31
DEGS1-201ENST00000323699 LSP1P33241 339 aa17.02■□□□□ 0.31
DEGS1-201ENST00000323699 HOXD13P35453 343 aa17.02■□□□□ 0.31
DEGS1-201ENST00000323699 STAT3P40763 770 aa17.02■□□□□ 0.31
DEGS1-201ENST00000323699 CUL1Q13616 776 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms