RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 NELFCDQ8IXH7 590 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 METTL13Q8N6R0 699 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 P3H4Q92791 437 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 CHMP6Q96FZ7 201 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 CALR3Q96L12 384 aaKnown RBP19.55■□□□□ 0.72
PRKCB-202ENST00000321728 KDM4CQ9H3R0 1056 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 TTI1O43156 1089 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
PRKCB-202ENST00000321728 MYCNP04198 464 aaPredicted RBP19.54■□□□□ 0.72
PRKCB-202ENST00000321728 PTK2Q05397 1052 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 NUDT12Q9BQG2 462 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 TRIM31Q9BZY9 425 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 LRRC4CQ9HCJ2 640 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 TMEM260Q9NX78 707 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 AIPL1Q9NZN9 384 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 MYH7BA7E2Y1 1941 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 PALM3A6NDB9 673 aaPredicted RBP19.54■□□□□ 0.72
PRKCB-202ENST00000321728 PPP1R12BO60237 982 aaPredicted RBP19.54■□□□□ 0.72
PRKCB-202ENST00000321728 PARP10Q53GL7 1025 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 KRT79Q5XKE5 535 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 KCNK18Q7Z418 384 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 REXO1Q8N1G1 1221 aaKnown RBP19.54■□□□□ 0.72
PRKCB-202ENST00000321728 TMEM47Q9BQJ4 181 aa19.54■□□□□ 0.72
PRKCB-202ENST00000321728 CELF4Q9BZC1 486 aaKnown RBP19.54■□□□□ 0.72
PRKCB-202ENST00000321728 A0A1B0GUA9 196 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 MGRN1O60291 552 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 DNAJC8O75937 253 aaPredicted RBP19.53■□□□□ 0.72
PRKCB-202ENST00000321728 TRIM37O94972 964 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 PEX26Q7Z412 305 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 KIRREL3Q8IZU9 778 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 SLC44A5Q8NCS7 719 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 CCDC197Q8NCU1 140 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 CCDC26Q8TAB7 109 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 ATP6V0A4Q9HBG4 840 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 ATP8A1Q9Y2Q0 1164 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 F8VZ95 297 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 F8W031 263 aaPredicted RBP19.53■□□□□ 0.72
PRKCB-202ENST00000321728 CCDC188H7C350 402 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 ELF3P78545 371 aaPredicted RBP19.53■□□□□ 0.72
PRKCB-202ENST00000321728 COASYQ13057 564 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 NBPF9Q3BBW0 867 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 ZCWPW2Q504Y3 356 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 ZNF444Q8N0Y2 327 aaPredicted RBP19.53■□□□□ 0.72
PRKCB-202ENST00000321728 XPO6Q96QU8 1125 aaKnown RBP19.53■□□□□ 0.72
PRKCB-202ENST00000321728 RAB34Q9BZG1 259 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 LRRC27Q9C0I9 530 aa19.53■□□□□ 0.72
PRKCB-202ENST00000321728 CNOT10Q9H9A5 744 aaKnown RBP19.53■□□□□ 0.72
PRKCB-202ENST00000321728 SEC63Q9UGP8 760 aaKnown RBP19.53■□□□□ 0.72
PRKCB-202ENST00000321728 XIRP1Q702N8 1843 aaKnown RBP19.52■□□□□ 0.72
PRKCB-202ENST00000321728 ATP6V1G2O95670 118 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 GHRP10912 638 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 PAX7P23759 505 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 CRYMQ14894 314 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 NAA25Q14CX7 972 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 FAM26FQ5R3K3 315 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 TEX11Q8IYF3 940 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 ANKS4BQ8N8V4 417 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 SPAG5Q96R06 1193 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 NOD2Q9HC29 1040 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 PNMA2Q9UL42 364 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 UTP11Q9Y3A2 253 aaKnown RBP19.52■□□□□ 0.72
PRKCB-202ENST00000321728 CCT8L1PA6NM43 557 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 C12orf60Q5U649 245 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 ZNF571Q7Z3V5 609 aaPredicted RBP19.52■□□□□ 0.72
PRKCB-202ENST00000321728 TAX1BP1Q86VP1 789 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 TRIM59Q8IWR1 403 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 LRRC57Q8N9N7 239 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 MTMR9Q96QG7 549 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 LZTS2Q9BRK4 669 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 PANK4Q9NVE7 773 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 MINPP1Q9UNW1 487 aa19.52■□□□□ 0.72
PRKCB-202ENST00000321728 CCDC88AQ3V6T2 1871 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 SLC37A4O43826 429 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 NEBLO76041 1014 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 ACTN1P12814 892 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 C10orf76Q5T2E6 689 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 ERMARDQ5T6L9 678 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 TXNRD3Q86VQ6 643 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 SELENOSQ9BQE4 189 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 LAMB1P07942 1786 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 BTNL10A8MVZ5 291 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 PPIP5K2O43314 1243 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 TDP2O95551 362 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 GNA14O95837 355 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 FXR2P51116 673 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■■■□□ 16.4
PRKCB-202ENST00000321728 SIK1P57059 783 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 ALKBH5Q6P6C2 394 aaKnown RBP19.51■□□□□ 0.71
PRKCB-202ENST00000321728 TCP11Q8WWU5 503 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 CEP63Q96MT8 703 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 FGFBP2Q9BYJ0 223 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 SLITRK6Q9H5Y7 841 aa19.51■□□□□ 0.71
PRKCB-202ENST00000321728 BUB1BO60566 1050 aaPredicted RBP19.5■□□□□ 0.71
PRKCB-202ENST00000321728 CAND2O75155 1236 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 CHADLQ6NUI6 762 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 PNMA8AQ86V59 439 aaPredicted RBP19.5■□□□□ 0.71
PRKCB-202ENST00000321728 TPCN2Q8NHX9 752 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 UIMC1Q96RL1 719 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 FAM129AQ9BZQ8 928 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 GANQ9H2C0 597 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms