RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 NR3C1P04150 777 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 PSMC2P35998 433 aaKnown RBP12.02□□□□□ -0.48
TOP3A-201ENST00000321105 NPEPPSP55786 919 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.48
TOP3A-201ENST00000321105 DGKZQ13574 1117 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 REEP2Q9BRK0 252 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 AP1M1Q9BXS5 423 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 DEFB129Q9H1M3 183 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 PCDHA13Q9Y5I0 950 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 DUSP10Q9Y6W6 482 aa12.02□□□□□ -0.48
TOP3A-201ENST00000321105 ESYT3A0FGR9 886 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 IL1R1P14778 569 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 TMOD1P28289 359 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 MYL7Q01449 175 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-201ENST00000321105 BAATQ14032 418 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-201ENST00000321105 SWSAP1Q6NVH7 229 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-201ENST00000321105 APOL6Q9BWW8 343 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 EXOC7Q9UPT5 735 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 SHTN1A0MZ66 631 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 MYBP10242 640 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 GMPSP49915 693 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-201ENST00000321105 ATP1A2P50993 1020 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 PSMC6P62333 389 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 CXCL9Q07325 125 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 ELMO3Q96BJ8 720 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 PKNOX2Q96KN3 472 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 SELENOSQ9BQE4 189 aa12.02□□□□□ -0.49
TOP3A-201ENST00000321105 KRIT1O00522 736 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 CD58P19256 250 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 AP3B2Q13367 1082 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 PLA2G4FQ68DD2 849 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 ALKBH5Q6P6C2 394 aaKnown RBP12.01□□□□□ -0.49
TOP3A-201ENST00000321105 RNF169Q8NCN4 708 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 IFNB1P01574 187 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 LRRC63Q05C16 580 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 LONRF2Q1L5Z9 754 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 DCUN1D2Q6PH85 259 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 SLC7A3Q8WY07 619 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 NLRP4Q96MN2 994 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 KIFC3Q9BVG8 833 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 METTL14Q9HCE5 456 aaKnown RBP12.01□□□□□ -0.49
TOP3A-201ENST00000321105 A0A0U1RQJ8 604 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 GRB10Q13322 594 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 NFRKBQ6P4R8 1299 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 KCNK18Q7Z418 384 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 CATSPER3Q86XQ3 398 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 CCDC105Q8IYK2 499 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 GLIS2Q9BZE0 524 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-201ENST00000321105 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 PTPN22Q9Y2R2 807 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 GOLGA6BA6NDN3 693 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 MYL1P05976 194 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 GABBR1Q9UBS5 961 aa12.01□□□□□ -0.49
TOP3A-201ENST00000321105 NXF1Q9UBU9 619 aaKnown RBP12.01□□□□□ -0.49
TOP3A-201ENST00000321105 TMEM150BA6NC51 233 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 MED24O75448 989 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 SLC9A1P19634 815 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 KNOP1Q1ED39 458 aaKnown RBP12□□□□□ -0.49
TOP3A-201ENST00000321105 FAM160B2Q86V87 743 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 HOOK3Q86VS8 718 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 GUF1Q8N442 669 aaKnown RBP12□□□□□ -0.49
TOP3A-201ENST00000321105 FBXL16Q8N461 479 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 GGA3Q9NZ52 723 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 NYAP2Q9P242 653 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 ASIC3Q9UHC3 531 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 HERC5Q9UII4 1024 aaKnown RBP12□□□□□ -0.49
TOP3A-201ENST00000321105 RHOBTB3O94955 611 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 LRRN4CLQ8ND94 238 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 ATG4CQ96DT6 458 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 ZDHHC15Q96MV8 337 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 SUGT1Q9Y2Z0 365 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 PVALEFA0A1B0GWK0 134 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
TOP3A-201ENST00000321105 MXI1P50539 228 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 TFAMQ00059 246 aaKnown RBP12□□□□□ -0.49
TOP3A-201ENST00000321105 KCTD2Q14681 263 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 WHAMMP3Q1A5X7 153 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 SUPT20HL1Q3ZLR7 823 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 KAZNQ674X7 775 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 GJB7Q6PEY0 223 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 SCARA5Q6ZMJ2 495 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 SESTD1Q86VW0 696 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 GIMAP8Q8ND71 665 aaPredicted RBP12□□□□□ -0.49
TOP3A-201ENST00000321105 TRIM6Q9C030 488 aaPredicted RBP12□□□□□ -0.49
TOP3A-201ENST00000321105 MYOZ2Q9NPC6 264 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 AMFRQ9UKV5 643 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 USP20Q9Y2K6 914 aa12□□□□□ -0.49
TOP3A-201ENST00000321105 PRELPP51888 382 aa11.99□□□□□ -0.49
TOP3A-201ENST00000321105 IL17AQ16552 155 aa11.99□□□□□ -0.49
TOP3A-201ENST00000321105 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
TOP3A-201ENST00000321105 MMS19Q96T76 1030 aa11.99□□□□□ -0.49
TOP3A-201ENST00000321105 PLVAPQ9BX97 442 aa11.99□□□□□ -0.49
TOP3A-201ENST00000321105 VCPKMTQ9H867 229 aa11.99□□□□□ -0.49
TOP3A-201ENST00000321105 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
TOP3A-201ENST00000321105 NFIBO00712 420 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms