RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TAF1DQ9H5J8 278 aaPredicted RBP8.19□□□□□ -1.1
CDHR3-201ENST00000317716 ECT2Q9H8V3 914 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 ETNK1Q9HBU6 452 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 MTUS1Q9ULD2 1270 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 USP17L3A6NCW0 530 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 USP17L4A6NCW7 530 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 UFL1O94874 794 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 FAM107AO95990 144 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 KLRC1P26715 233 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 GNAQP50148 359 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 SATB1Q01826 763 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 HHATQ5VTY9 493 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 HAUS3Q68CZ6 603 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 SEPT14Q6ZU15 432 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 USP17L1Q7RTZ2 530 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 SUGP1Q8IWZ8 645 aaKnown RBP8.19□□□□□ -1.1
CDHR3-201ENST00000317716 REXO1Q8N1G1 1221 aaKnown RBP8.19□□□□□ -1.1
CDHR3-201ENST00000317716 PPP1R14CQ8TAE6 165 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 NEK9Q8TD19 979 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 CHMP6Q96FZ7 201 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 THAP9Q9H5L6 903 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 ARMCX3Q9UH62 379 aaPredicted RBP8.19□□□□□ -1.1
CDHR3-201ENST00000317716 GJA3Q9Y6H8 435 aa8.19□□□□□ -1.1
CDHR3-201ENST00000317716 KLRF2D3W0D1 207 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 SEMA3EO15041 775 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 THAP12O43422 761 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 CHN1P15882 459 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 NR2F2P24468 414 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 SUPT20HQ8NEM7 779 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 DHTKD1Q96HY7 919 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 PACSIN1Q9BY11 444 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 ZMYND12Q9H0C1 365 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 VPS37BQ9H9H4 285 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 PANK4Q9NVE7 773 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 TMOD4Q9NZQ9 345 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 PLCH1Q4KWH8 1693 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 RASGRF2O14827 1237 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 OPHN1O60890 802 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 FAM13AO94988 1023 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 ACTN1P12814 892 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 BRD2P25440 801 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 SCTRP47872 440 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 CHRNDQ07001 517 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 MTM1Q13496 603 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 PARP10Q53GL7 1025 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 FAM83BQ5T0W9 1011 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 C6orf163Q5TEZ5 329 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 PRR5LQ6MZQ0 368 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 ZC3H18Q86VM9 953 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 ZNF579Q8NAF0 562 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 TBCKQ8TEA7 893 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 TGFBRAP1Q8WUH2 860 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 RAPGEF5Q92565 580 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 PRCCQ92733 491 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 COA7Q96BR5 231 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 SH2D4AQ9H788 454 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 DISP2A7MBM2 1401 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 H7C1W4 665 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 ANP32DO95626 131 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 PCCAP05165 728 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 CNGA1P29973 690 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 STAT1P42224 750 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 RAD23BP54727 409 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 RPS8P62241 208 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 ZNF365Q70YC5 407 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 SRRM1Q8IYB3 904 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 LRRC47Q8N1G4 583 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 DTX3LQ8TDB6 740 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 LARP4BQ92615 738 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 CAMKK2Q96RR4 588 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 IQCGQ9H095 443 aaKnown RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 TMEM60Q9H2L4 133 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 VCPKMTQ9H867 229 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 EPB41L4AQ9HCS5 686 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-201ENST00000317716 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 FAM53CQ9NYF3 392 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 KIAA1024Q9UPX6 916 aa8.18□□□□□ -1.1
CDHR3-201ENST00000317716 SFI1A8K8P3 1242 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 GSG1L2A8MUP6 293 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 TCP11X1B4DZS4 312 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 AP1G2O75843 785 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 EPB41P11171 864 aaKnown RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 XRCC5P13010 732 aaKnown RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 HSD17B3P37058 310 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 TMED2Q15363 201 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 EXOC3L4Q17RC7 722 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 ADSSL1Q8N142 457 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 SLC44A5Q8NCS7 719 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 ABTB1Q969K4 478 aaPredicted RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 MTMR8Q96EF0 704 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 NOC2LQ9Y3T9 749 aaKnown RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 IKBKGQ9Y6K9 419 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DCAF8L1A6NGE4 600 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 PLSCR1O15162 318 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 KRT5P13647 590 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms