RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 TMCO5AQ8N6Q1 288 aa9.38□□□□□ -0.91
USF3-201ENST00000316407 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.38□□□□□ -0.91
USF3-201ENST00000316407 MLXIPQ9HAP2 919 aa9.38□□□□□ -0.91
USF3-201ENST00000316407 GTSE1Q9NYZ3 720 aa9.38□□□□□ -0.91
USF3-201ENST00000316407 ACEP12821 1306 aa9.38□□□□□ -0.91
USF3-201ENST00000316407 FAM178BQ8IXR5 827 aa9.38□□□□□ -0.91
USF3-201ENST00000316407 WDR24Q96S15 920 aa9.38□□□□□ -0.91
USF3-201ENST00000316407 UBE2TQ9NPD8 197 aaPredicted RBP9.38□□□□□ -0.91
USF3-201ENST00000316407 IPO11Q9UI26 975 aaKnown RBP9.38□□□□□ -0.91
USF3-201ENST00000316407 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
USF3-201ENST00000316407 CUL7Q14999 1698 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 GYS1P13807 737 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 ZC3H12BQ5HYM0 836 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 BLIDQ8IZY5 108 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 ALKBH8Q96BT7 664 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 CEP78Q5JTW2 689 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 TRIML1Q8N9V2 468 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 PPHLN1Q8NEY8 458 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 GOLGA8IPA6NC78 632 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 CLIC2O15247 247 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 TRAF1Q13077 416 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 HIF1AQ16665 826 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 BZW1Q7L1Q6 419 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 ATP6V1G3Q96LB4 118 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 GOLGA8RI6L899 631 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 MEFVO15553 781 aaPredicted RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 SERPINB1P30740 379 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 PLD3Q8IV08 490 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 ZSCAN10Q96SZ4 725 aaPredicted RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 C19orf44Q9H6X5 657 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 MYO18AQ92614 2054 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 PMLP29590 882 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 CDC25AP30304 524 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 CYP4A11Q02928 519 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 DMC1Q14565 340 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 PUM3Q15397 648 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 ANO5Q75V66 913 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 GID8Q9NWU2 228 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 KIAA1024Q9UPX6 916 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 ZNF189O75820 626 aaPredicted RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 HAUS5O94927 633 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 S100A5P33763 92 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 AURKCQ9UQB9 309 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 COPEO14579 308 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 GFPT1Q06210 699 aaPredicted RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 TGFBRAP1Q8WUH2 860 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 NDEL1Q9GZM8 345 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 GIPC2Q8TF65 315 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
USF3-201ENST00000316407 SUGT1Q9Y2Z0 365 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 ADGBQ8N7X0 1667 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 IQANK1A0A1B0GTG1 560 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 APOA1P02647 267 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 TTC30BQ8N4P2 665 aa9.37□□□□□ -0.91
USF3-201ENST00000316407 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
USF3-201ENST00000316407 CAB39Q9Y376 341 aaPredicted RBP9.36□□□□□ -0.91
USF3-201ENST00000316407 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 PSMD7P51665 324 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 KLC3Q6P597 504 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 PLEKHM3Q6ZWE6 761 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 NUP93Q8N1F7 819 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 HEMGNQ9BXL5 484 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 KLHL25Q9H0H3 589 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 SYNDIG1LA6NDD5 238 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 EXOC5O00471 708 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 GOLGA8HP0CJ92 632 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 SDR42E1Q8WUS8 393 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 APPBP2Q92624 585 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 PBKQ96KB5 322 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 FAM135BQ49AJ0 1406 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 KRT27Q7Z3Y8 459 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 TLK2Q86UE8 772 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 OMA1Q96E52 524 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 SLC13A1Q9BZW2 595 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 ORC4O43929 436 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 CENPUQ71F23 418 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 PARD3BQ8TEW8 1205 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 KIF2CQ99661 725 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 LVRNQ6Q4G3 990 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 KBTBD3Q8NAB2 608 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 PSTPIP2Q9H939 334 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 WASHC5Q12768 1159 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 ZNF277Q9NRM2 450 aaPredicted RBP9.36□□□□□ -0.91
USF3-201ENST00000316407 MYH15Q9Y2K3 1946 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 MFAP3LO75121 409 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 SYCP2LQ5T4T6 812 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 CFAP73A6NFT4 308 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 ZNF185O15231 689 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 CYP2C19P33261 490 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 MECOMQ03112 1051 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 NEK8Q86SG6 692 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 INPP5DQ92835 1189 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 RWDD2AQ9UIY3 292 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 PCDHA12Q9UN75 941 aa9.36□□□□□ -0.91
USF3-201ENST00000316407 KIAA0825Q8IV33 1275 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms