RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 TBCCQ15814 346 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 PASD1Q8IV76 773 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 GSPT2Q8IYD1 628 aaKnown RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 RASGRF2O14827 1237 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 ZNF500O60304 480 aaPredicted RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 ATP2B4P23634 1241 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 HOXA13P31271 388 aaPredicted RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 MIS18BP1Q6P0N0 1132 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 MRFAP1Q9Y605 127 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 SIX6OS1Q8N1H7 587 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 TRPC5Q9UL62 973 aaPredicted RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 CARMIL3Q8ND23 1372 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 CA4P22748 312 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 DR1Q01658 176 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 ACBD5Q5T8D3 534 aaPredicted RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 PRPF38AQ8NAV1 312 aaKnown RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 PYROXD1Q8WU10 500 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 NUGGCQ68CJ6 796 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 CACTINQ8WUQ7 758 aaKnown RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 FAF2Q96CS3 445 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 CTTNQ14247 550 aaKnown RBP22.54■■□□□ 1.2
KDM3B-201ENST00000314358 HSPA4LO95757 839 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 USP17L2Q6R6M4 530 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 ZMYND12Q9H0C1 365 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 SLC12A6Q9UHW9 1150 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 YEATS2Q9ULM3 1422 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 CYP2D7A0A087X1C5 515 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 ZNF589Q86UQ0 364 aaPredicted RBP22.53■■□□□ 1.2
KDM3B-201ENST00000314358 NLRP4Q96MN2 994 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 GTPBP10A4D1E9 387 aaKnown RBP22.53■■□□□ 1.2
KDM3B-201ENST00000314358 SRGAP2O75044 1071 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 FAM47EQ6ZV65 393 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 HEMGNQ9BXL5 484 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 WARS2Q9UGM6 360 aaKnown RBP22.53■■□□□ 1.2
KDM3B-201ENST00000314358 KIAA0232Q92628 1395 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 PPP6R3Q5H9R7 873 aaPredicted RBP22.53■■□□□ 1.2
KDM3B-201ENST00000314358 TRIM42Q8IWZ5 723 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 USP44Q9H0E7 712 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 TRPV6Q9H1D0 765 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 POLD4Q9HCU8 107 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 SARS2Q9NP81 518 aaKnown RBP22.53■■□□□ 1.2
KDM3B-201ENST00000314358 TXLNGQ9NUQ3 528 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 E2F6O75461 281 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 SNX19Q92543 992 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 CCDC90BQ9GZT6 254 aa22.53■■□□□ 1.2
KDM3B-201ENST00000314358 SSTR3P32745 418 aaPredicted RBP22.52■■□□□ 1.2
KDM3B-201ENST00000314358 APBA1Q02410 837 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 DCAF15Q66K64 600 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 ADGBQ8N7X0 1667 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 NR1D1P20393 614 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 ERFP50548 548 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 ZBED1O96006 694 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 UNC5CLQ8IV45 518 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 STK25O00506 426 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 RGS9BPQ6ZS82 235 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 AMNQ9BXJ7 453 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 FAM8A1Q9UBU6 413 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 ZSCAN20P17040 1043 aaPredicted RBP22.52■■□□□ 1.2
KDM3B-201ENST00000314358 EFCAB13Q8IY85 973 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 DYNLL2Q96FJ2 89 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 ANGPTL2Q9UKU9 493 aa22.52■■□□□ 1.2
KDM3B-201ENST00000314358 FRA10AC1Q70Z53 315 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 SLC24A3Q9HC58 644 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 ABCB6Q9NP58 842 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 SH3BGRP55822 239 aaPredicted RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 ZNF658Q5TYW1 1059 aaPredicted RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 GTSE1Q9NYZ3 720 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 PPARGC1AQ9UBK2 798 aaKnown RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 DNAJC6O75061 913 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 ZC3H12BQ5HYM0 836 aaKnown RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 RETREG2Q8NC44 543 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 AP5M1Q9H0R1 490 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 SAYSD1Q9NPB0 183 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 RNF139Q8WU17 664 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 FMO2Q99518 471 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 ANTXR1Q9H6X2 564 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 CRKLP46109 303 aaKnown RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 MAN2A1Q16706 1144 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 SLITRK6Q9H5Y7 841 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 ZC4H2Q9NQZ6 224 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 TEKT2Q9UIF3 430 aa22.51■■□□□ 1.19
KDM3B-201ENST00000314358 EIF3CLB5ME19 914 aaKnown RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 FMNL1O95466 1100 aaPredicted RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 EIF3CQ99613 913 aaKnown RBP22.51■■□□□ 1.19
KDM3B-201ENST00000314358 FLOT2Q14254 428 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 TTC1Q99614 292 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 PRDM5Q9NQX1 630 aaPredicted RBP22.5■■□□□ 1.19
KDM3B-201ENST00000314358 ZBTB38Q8NAP3 1195 aaPredicted RBP22.5■■□□□ 1.19
KDM3B-201ENST00000314358 KDM5AP29375 1690 aaKnown RBP22.5■■□□□ 1.19
KDM3B-201ENST00000314358 LRRC23Q53EV4 343 aaPredicted RBP22.5■■□□□ 1.19
KDM3B-201ENST00000314358 SYCE1LA8MT33 242 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 C16orf87Q6PH81 154 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 PLAAQ9Y263 795 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 TMPRSS15P98073 1019 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 PI16Q6UXB8 463 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 DACH2Q96NX9 599 aa22.5■■□□□ 1.19
KDM3B-201ENST00000314358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.197e-8■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms