RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 ANKFY1Q9P2R3 1169 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 JRKLQ9Y4A0 524 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 PCDHAC2Q9Y5I4 1007 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 PDS5AQ29RF7 1337 aaKnown RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 OSTNP61366 133 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 MKRN3Q13064 507 aaKnown RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 PDXDC2PQ6P474 469 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 SAMD7Q7Z3H4 446 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 ARFGAP2Q8N6H7 521 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 CEP63Q96MT8 703 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 DNAI2Q9GZS0 605 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 HDAC6Q9UBN7 1215 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 SYCE1Q8N0S2 351 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 SLC7A3Q8WY07 619 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 AGBL1Q96MI9 1066 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 EYA4O95677 639 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 SLC7A5Q01650 507 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 REEP2Q9BRK0 252 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 LXNQ9BS40 222 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 PADI6Q6TGC4 694 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 ST7Q9NRC1 585 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 ZC2HC1CQ53FD0 456 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 SNRNP48Q6IEG0 339 aaKnown RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 GOLGA6CA6NDK9 693 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 NR3C1P04150 777 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 GOLGA6DP0CG33 693 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 SF3A3Q12874 501 aaKnown RBP eCLIP6.75□□□□□ -1.332e-8■■□□□ 14.4
PRKDC-201ENST00000314191 KCTD2Q14681 263 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 PPP4R3CPQ6ZMV5 832 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 NAP1L3Q99457 506 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 GOLGA6AQ9NYA3 693 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 BZW2Q9Y6E2 419 aaKnown RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 ACTN1P12814 892 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 HOXA10P31260 410 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 ACTN2P35609 894 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 PDE6CP51160 858 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 DMP1Q13316 513 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-201ENST00000314191 ZBTB33Q86T24 672 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 RIOX1Q9H6W3 641 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 TBC1D22BQ9NU19 505 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 GCNT4Q9P109 453 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 PNMA2Q9UL42 364 aa6.75□□□□□ -1.33
PRKDC-201ENST00000314191 N4BP1O75113 896 aaKnown RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 HEXIM1O94992 359 aaKnown RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 GYPCP04921 128 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 SMARCA1P28370 1054 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 NAALADL2Q58DX5 795 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 WNT7AO00755 349 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 SWSAP1Q6NVH7 229 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 PDXDC1Q6P996 788 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 MICALL2Q8IY33 904 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 ELOA2Q8IYF1 753 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 CERS5Q8N5B7 392 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 GABBR1Q9UBS5 961 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 TRIM49P0CI25 452 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 TRIM49CP0CI26 452 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 GYS2P54840 703 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 HMGCS2P54868 508 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 CEP83Q9Y592 693 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 MIS18BP1Q6P0N0 1132 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 DCUN1D2Q6PH85 259 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 PROM2Q8N271 834 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 ZNF668Q96K58 619 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 C1orf112Q9NSG2 853 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 TYW1Q9NV66 732 aaKnown RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 SHMT1P34896 483 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 VPS41P49754 854 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 FXR2P51116 673 aaKnown RBP eCLIP6.74□□□□□ -1.332e-10■■■■■ 45.8
PRKDC-201ENST00000314191 PTK2Q05397 1052 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 STYK1Q6J9G0 422 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 TAAR1Q96RJ0 339 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 CAPN11Q9UMQ6 739 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 TFR2Q9UP52 801 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 AGTPBP1Q9UPW5 1226 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 CCDC151A5D8V7 595 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 LRRC45Q96CN5 670 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 KCNK9Q9NPC2 374 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 PODXL2Q9NZ53 605 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 UTP11Q9Y3A2 253 aaKnown RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 MED24O75448 989 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 BAATQ14032 418 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 CCDC77Q9BR77 488 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 HOXC10Q9NYD6 342 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 MYBP10242 640 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 SLC9A1P19634 815 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 ZBTB8OSQ8IWT0 167 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 RPAP3Q9H6T3 665 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 EPB41L5Q9HCM4 733 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 HIP1RO75146 1068 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 CEP55Q53EZ4 464 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 ZNF653Q96CK0 615 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 INTS2Q9H0H0 1204 aaKnown RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 FAN1Q9Y2M0 1017 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 GOLGA6L7A0A1B0GV03 622 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 ATP1A1P05023 1023 aaKnown RBP6.74□□□□□ -1.33
PRKDC-201ENST00000314191 CATSPER3Q86XQ3 398 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 KBTBD4Q9NVX7 518 aa6.74□□□□□ -1.33
PRKDC-201ENST00000314191 RGL2O15211 777 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 MICALCLQ6ZW33 695 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 SERPINA10Q9UK55 444 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms