RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CRCPO75575 148 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 HEXIM1O94992 359 aaKnown RBP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 ADCY8P40145 1251 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 NPEPPSP55786 919 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 STAT4Q14765 748 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 PNMA6FA0A0J9YX94 578 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 ZBED4O75132 1171 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CDH16O75309 829 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 DDIT3P35638 169 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 GUCY2DQ02846 1103 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 TBC1D9BQ66K14 1250 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 AGGF1Q8N302 714 aaeCLIP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 BBS5Q8N3I7 341 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 TLDC2A0PJX2 215 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 PALM3A6NDB9 673 aaPredicted RBP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 AP2B1P63010 937 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 ODR4Q5SWX8 454 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 LRRC8BQ6P9F7 803 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 YTHDF3Q7Z739 585 aaKnown RBP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 TAB2Q9NYJ8 693 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 UVRAGQ9P2Y5 699 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 MAN1B1Q9UKM7 699 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 MYO1CO00159 1063 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 NR2F2P24468 414 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 STX17P56962 302 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CCDC28BQ9BUN5 200 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 LRRC2Q9BYS8 371 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CITO14578 2027 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 HSPA1LP34931 641 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 DPCR1Q3MIW9 517 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 C1orf131Q8NDD1 294 aaKnown RBP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 JDP2Q8WYK2 163 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 SAAL1Q96ER3 474 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 VPS37BQ9H9H4 285 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 MAP3K20Q9NYL2 800 aaKnown RBP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 ABLIM1O14639 778 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CRYMQ14894 314 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 BTNL9Q6UXG8 535 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 GCNT4Q9P109 453 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 LIMA1Q9UHB6 759 aaKnown RBP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CFAP69A5D8W1 941 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CYP21A2P08686 494 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 POLR2MP0CAP2 368 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 GPTP24298 496 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CCND1P24385 295 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CYP2C19P33261 490 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 TRAPPC11Q7Z392 1133 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 C17orf75Q9HAS0 396 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 TUBE1Q9UJT0 475 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 RIPOR2Q9Y4F9 1068 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 ANKRD36CQ5JPF3 1778 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 ARHGAP23Q9P227 1491 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 PAMP19021 973 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 MOXD1Q6UVY6 613 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 CFAP61Q8NHU2 1237 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 PRPF31Q8WWY3 499 aaKnown RBP9.5□□□□□ -0.89
COL6A5-202ENST00000312481 NSMCE4AQ9NXX6 385 aa9.5□□□□□ -0.89
COL6A5-202ENST00000312481 KIF13AQ9H1H9 1805 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 PPP2R2AP63151 447 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 TFAP4Q01664 338 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 MYO1EQ12965 1108 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 PDXDC1Q6P996 788 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 RAB44Q7Z6P3 723 aaPredicted RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 PRUNE1Q86TP1 453 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 KLHL29Q96CT2 875 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 CMTM5Q96DZ9 223 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 SMARCAL1Q9NZC9 954 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ARHGAP26Q9UNA1 814 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 TNS3Q68CZ2 1445 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 O00370 1275 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 RWDD2BP57060 319 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 MYL7Q01449 175 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 MYBPC2Q14324 1141 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ADPGKQ9BRR6 497 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 TRAIPQ9BWF2 469 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 SERTAD1Q9UHV2 236 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 PCDHA13Q9Y5I0 950 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 RGPD8O14715 1765 aaPredicted RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 HARSP12081 509 aaKnown RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ARID5AQ03989 594 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ITIH4Q14624 930 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 STILQ15468 1287 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 TRIM55Q9BYV6 548 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 JAK2O60674 1132 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 TNFRSF8P28908 595 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 PSMC4P43686 418 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 NAA20P61599 178 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 PPP2R5DQ14738 602 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 DNAL1Q4LDG9 190 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 UIMC1Q96RL1 719 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 NAT9Q9BTE0 207 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 BSDC1Q9NW68 430 aaPredicted RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 TJP1Q07157 1748 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 RPS6KA5O75582 802 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 PFKFB3Q16875 520 aaPredicted RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 KCNV1Q6PIU1 500 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms