RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 VEGFAP15692 232 aaPredicted RBP19.7■□□□□ 0.74
SPSB4-201ENST00000310546 ASIC1P78348 528 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 ASTE1Q2TB18 679 aaPredicted RBP19.7■□□□□ 0.74
SPSB4-201ENST00000310546 LRRC34Q8IZ02 419 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 TRIM31Q9BZY9 425 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 CNOT10Q9H9A5 744 aaKnown RBP19.7■□□□□ 0.74
SPSB4-201ENST00000310546 AMACRQ9UHK6 382 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 ATP8A1Q9Y2Q0 1164 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 MYH7P12883 1935 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 NQO1P15559 274 aaKnown RBP19.7■□□□□ 0.74
SPSB4-201ENST00000310546 SSR1P43307 286 aaKnown RBP19.7■□□□□ 0.74
SPSB4-201ENST00000310546 IFNAR2P48551 515 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 DTHD1Q6ZMT9 781 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 CCDC84Q86UT8 332 aaPredicted RBP19.7■□□□□ 0.74
SPSB4-201ENST00000310546 KCNV2Q8TDN2 545 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 MTFR1LQ9H019 292 aa19.7■□□□□ 0.74
SPSB4-201ENST00000310546 LINGO3P0C6S8 592 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 RASGRF1Q13972 1273 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 ANKRD20A2Q5SQ80 823 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 ANKRD20A1Q5TYW2 823 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 ANKRD20A3Q5VUR7 823 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 CATIPQ7Z7H3 387 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 LCORLQ8N3X6 602 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 BAP1Q92560 729 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 DPH5Q9H2P9 285 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 BTAF1O14981 1849 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 MYH7BA7E2Y1 1941 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 UBOX5O94941 541 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 BLMHQ13867 455 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 PUM3Q15397 648 aaKnown RBP19.69■□□□□ 0.74
SPSB4-201ENST00000310546 RPS6KA1Q15418 735 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 NAB2Q15742 525 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 SLC30A9Q6PML9 568 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 TMC3Q7Z5M5 1100 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 PROM2Q8N271 834 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 ENAHQ8N8S7 591 aaPredicted RBP19.69■□□□□ 0.74
SPSB4-201ENST00000310546 NLRP3Q96P20 1036 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 PACSIN1Q9BY11 444 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 MROH5Q6ZUA9 1318 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 IGF2BP3O00425 579 aaKnown RBP eCLIP19.69■□□□□ 0.74
SPSB4-201ENST00000310546 NFIXQ14938 502 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 IFIT1BQ5T764 474 aaKnown RBP19.69■□□□□ 0.74
SPSB4-201ENST00000310546 HGSNATQ68CP4 663 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 RASGRP4Q8TDF6 673 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 TBC1D5Q92609 795 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 KBTBD4Q9NVX7 518 aa19.69■□□□□ 0.74
SPSB4-201ENST00000310546 COL4A1P02462 1669 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 CCND1P24385 295 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 ABL2P42684 1182 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 SLC9C1Q4G0N8 1177 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 ARL6IP4Q66PJ3 421 aaKnown RBP19.68■□□□□ 0.74
SPSB4-201ENST00000310546 LRRC15Q8TF66 581 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 IQCDQ96DY2 449 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 PRMT1Q99873 361 aaKnown RBP19.68■□□□□ 0.74
SPSB4-201ENST00000310546 OSBPL1AQ9BXW6 950 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 RAB27AP51159 221 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 RPS6KA3P51812 740 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 RCAN1P53805 252 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 ITIH4Q14624 930 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 SEC23AQ15436 765 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 ARMC3Q5W041 872 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 PDXDC1Q6P996 788 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
SPSB4-201ENST00000310546 RNF41Q9H4P4 317 aaPredicted RBP19.68■□□□□ 0.74
SPSB4-201ENST00000310546 ARHGEF10LQ9HCE6 1279 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 TMEM59LQ9UK28 342 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 RTL9Q8NET4 1388 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 LRP5O75197 1615 aa19.68■□□□□ 0.74
SPSB4-201ENST00000310546 F8VZ95 297 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 HGSO14964 777 aaPredicted RBP19.67■□□□□ 0.74
SPSB4-201ENST00000310546 NEFHP12036 1026 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 FGFR2P21802 821 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 TRAPPC10P48553 1259 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 KLHL29Q96CT2 875 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 ECT2Q9H8V3 914 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 GOPCQ9HD26 462 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 LUC7LQ9NQ29 371 aaKnown RBP19.67■□□□□ 0.74
SPSB4-201ENST00000310546 ADAMTS1Q9UHI8 967 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 ASAP2O43150 1006 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 SMIM24O75264 130 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 ATP2A2P16615 1042 aaKnown RBP19.67■□□□□ 0.74
SPSB4-201ENST00000310546 CTCFP49711 727 aaPredicted RBP19.67■□□□□ 0.74
SPSB4-201ENST00000310546 TAF11Q15544 211 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 CLEC4GQ6UXB4 293 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 TPTE2Q6XPS3 522 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 PIGWQ7Z7B1 504 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 ESR2Q92731 530 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 SEMA6BQ9H3T3 888 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 KCNMB3Q9NPA1 279 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
SPSB4-201ENST00000310546 SSU72P8A0A1W2PR75 194 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 KRT16P08779 473 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 TRAF1Q13077 416 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 PPP2R5BQ15173 497 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 CELF4Q9BZC1 486 aaKnown RBP19.66■□□□□ 0.74
SPSB4-201ENST00000310546 ZFATQ9P243 1243 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 PCDHGC5Q9Y5F6 944 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 KRIT1O00522 736 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 SHBGP04278 402 aa19.66■□□□□ 0.74
SPSB4-201ENST00000310546 ATP4AP20648 1035 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms