RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 DHX9Q08211 1270 aaKnown RBP16.9■□□□□ 0.3
PGAP3-202ENST00000309862 TMEM119Q4V9L6 283 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 DCAF17Q5H9S7 520 aaPredicted RBP16.9■□□□□ 0.3
PGAP3-202ENST00000309862 TCERG1LQ5VWI1 586 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 GJB7Q6PEY0 223 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 POTEBQ6S5H4 581 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 PEX26Q7Z412 305 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 IRF2BP2Q7Z5L9 587 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 GPBP1Q86WP2 473 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 LRRC45Q96CN5 670 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 EMILIN3Q9NT22 766 aa16.9■□□□□ 0.3
PGAP3-202ENST00000309862 DDX25Q9UHL0 483 aaKnown RBP16.9■□□□□ 0.3
PGAP3-202ENST00000309862 PGRMC1O00264 195 aaKnown RBP16.89■□□□□ 0.29
PGAP3-202ENST00000309862 RASSF9O75901 435 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 NR2F2P24468 414 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 CASP5P51878 434 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 TRIM51Q9BSJ1 452 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 NAGPAQ9UK23 515 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 PCDHA12Q9UN75 941 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 NR2E1Q9Y466 385 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 SMIM23A6NLE4 172 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 CHUKO15111 745 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 PPP2R2AP63151 447 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 PRPF4BQ13523 1007 aaKnown RBP16.89■□□□□ 0.29
PGAP3-202ENST00000309862 CUL1Q13616 776 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 PDIA5Q14554 519 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 CPLX4Q7Z7G2 160 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 ATP8A1Q9Y2Q0 1164 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
PGAP3-202ENST00000309862 LAMB1P07942 1786 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 OPLAHO14841 1288 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 STAT3P40763 770 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 BTDP43251 543 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 E2F5Q15329 346 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 DDB1Q16531 1140 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 DAAM2Q86T65 1068 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 NBPF5PQ86XG9 351 aaPredicted RBP16.88■□□□□ 0.29
PGAP3-202ENST00000309862 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
PGAP3-202ENST00000309862 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 CCDC172P0C7W6 258 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 PLA2G4BP0C869 781 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 UCHL3P15374 230 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 SLC16A2P36021 539 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 DDR1Q08345 913 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 IFFO1Q0D2I5 559 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 LRIG3Q6UXM1 1119 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 BCAS3Q9H6U6 928 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 AJAP1Q9UKB5 411 aaPredicted RBP16.88■□□□□ 0.29
PGAP3-202ENST00000309862 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 TPCN2Q8NHX9 752 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.294e-6■□□□□ 8
PGAP3-202ENST00000309862 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.88■□□□□ 0.29
PGAP3-202ENST00000309862 RREB1Q92766 1687 aa16.88■□□□□ 0.29
PGAP3-202ENST00000309862 CCDC65Q8IXS2 484 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 GIMAP7Q8NHV1 300 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 PBKQ96KB5 322 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 CEP63Q96MT8 703 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 LRRC27Q9C0I9 530 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 KCTD10Q9H3F6 313 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 GOPCQ9HD26 462 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 TLDC2A0PJX2 215 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 MEIS1O00470 390 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 CETN3O15182 167 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 RAD21O60216 631 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 BYSLQ13895 437 aaKnown RBP16.87■□□□□ 0.29
PGAP3-202ENST00000309862 TTBK2Q6IQ55 1244 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 CYB5D1Q6P9G0 228 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 CACNA2D3Q8IZS8 1091 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
PGAP3-202ENST00000309862 ACTRT1Q8TDG2 376 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 U2AF1L4Q8WU68 220 aaKnown RBP16.87■□□□□ 0.29
PGAP3-202ENST00000309862 PCDHA2Q9Y5H9 948 aa16.87■□□□□ 0.29
PGAP3-202ENST00000309862 ANKRD20A8PQ5CZ79 823 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 TMC3Q7Z5M5 1100 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 FUKQ8N0W3 1084 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 UHMK1Q8TAS1 419 aaKnown RBP16.86■□□□□ 0.29
PGAP3-202ENST00000309862 C1orf131Q8NDD1 294 aaKnown RBP16.86■□□□□ 0.29
PGAP3-202ENST00000309862 RIOX1Q9H6W3 641 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 OSGEPQ9NPF4 335 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 PNMA2Q9UL42 364 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 POTEFA5A3E0 1075 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
PGAP3-202ENST00000309862 FGGP02679 453 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 NFIXQ14938 502 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 EXOC3L4Q17RC7 722 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 POTEGQ6S5H5 508 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 POTEEQ6S8J3 1075 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 C16orf86Q6ZW13 317 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 FAM228AQ86W67 206 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 PARP9Q8IXQ6 854 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms