RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 TMEM260Q9NX78 707 aa10.08□□□□□ -0.8
XCR1-201ENST00000309285 TTLL3Q9Y4R7 772 aa10.08□□□□□ -0.8
XCR1-201ENST00000309285 EXOC3O60645 756 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 ZBED4O75132 1171 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 ARHGAP24Q8N264 748 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 OR8K1Q8NGG5 319 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 NACA2Q9H009 215 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 PI4KBQ9UBF8 816 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 TACC3Q9Y6A5 838 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 PSMD6Q15008 389 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 SMC1BQ8NDV3 1235 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 LRRC4BQ9NT99 713 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 VEGFAP15692 232 aaPredicted RBP10.07□□□□□ -0.8
XCR1-201ENST00000309285 HNRNPH1P31943 449 aaKnown RBP10.07□□□□□ -0.8
XCR1-201ENST00000309285 KRT31Q15323 416 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 DENND2CQ68D51 928 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 PODNQ7Z5L7 613 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 NAP1L4Q99733 375 aaKnown RBP10.07□□□□□ -0.8
XCR1-201ENST00000309285 PCDHA6Q9UN73 950 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 USTQ9Y2C2 406 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 PCDHA8Q9Y5H6 950 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 DAPK3O43293 454 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 NR1D1P20393 614 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 GEN1Q17RS7 908 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 LARP4BQ92615 738 aaKnown RBP10.07□□□□□ -0.8
XCR1-201ENST00000309285 IFIH1Q9BYX4 1025 aaKnown RBP10.07□□□□□ -0.8
XCR1-201ENST00000309285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.07□□□□□ -0.8
XCR1-201ENST00000309285 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
XCR1-201ENST00000309285 TRIM49BA6NDI0 452 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 SOWAHDA6NJG2 315 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 CTNND1O60716 968 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 RAD17O75943 681 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 PRCPP42785 496 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.06□□□□□ -0.8
XCR1-201ENST00000309285 ANKRD20A3Q5VUR7 823 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 SLC30A9Q6PML9 568 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 C16orf86Q6ZW13 317 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 TPH2Q8IWU9 490 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 CERKQ8TCT0 537 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 ZBTB10Q96DT7 871 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 TUBGCP2Q9BSJ2 902 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 TMEM60Q9H2L4 133 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 XAB2Q9HCS7 855 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 MTMR4Q9NYA4 1195 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 MTUS1Q9ULD2 1270 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 SH3BP5O60239 455 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 GCFC2P16383 781 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 ATP2A2P16615 1042 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 GGCXP38435 758 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 PPP2R5CQ13362 524 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 NCAPHQ15003 741 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 ARHGAP27Q6ZUM4 889 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 FBXO11Q86XK2 927 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 SPZ1Q9BXG8 430 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 ANO3Q9BYT9 981 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 TDRD3Q9H7E2 651 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 PNMA6FA0A0J9YX94 578 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 POTEMA6NI47 508 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 ALAS1P13196 640 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 DNM2P50570 870 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 RTFDC1Q9BY42 306 aaPredicted RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 DHX36Q9H2U1 1008 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 CUEDC2Q9H467 287 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 DNM3Q9UQ16 869 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 SNX16P57768 344 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 SNAP25P60880 206 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 MRPS25P82663 173 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 SLMAPQ14BN4 828 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 SUPT20HQ8NEM7 779 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 HAUS1Q96CS2 278 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 EIF2AQ9BY44 585 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 HAUS4Q9H6D7 363 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 KIAA1024Q9UPX6 916 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L15C9J2P7 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L10C9JJH3 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L13C9JLJ4 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L11C9JVI0 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L18D6R9N7 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L22D6RA61 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L17D6RBQ6 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L19D6RCP7 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L20D6RJB6 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 RGL2O15211 777 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 GCNT3O95395 438 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 CORO7P57737 925 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L24Q0WX57 530 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 PTPROQ16827 1216 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 SPOUT1Q5T280 376 aaKnown RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 E4F1Q66K89 784 aaPredicted RBP10.06□□□□□ -0.8
XCR1-201ENST00000309285 TTBK2Q6IQ55 1244 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 USP17L6PQ6QN14 398 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 RASGRP2Q7LDG7 609 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 CFAP61Q8NHU2 1237 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 CCDC51Q96ER9 411 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 AMNQ9BXJ7 453 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms