RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ANKRD20A12PQ8NF67 263 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 ZNF296Q8WUU4 475 aaPredicted RBP13.21□□□□□ -0.29
TRIM40-205ENST00000307859 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 ACAD9Q9H845 621 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 RGL1Q9NZL6 768 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 PCDHA2Q9Y5H9 948 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 CXCL11O14625 94 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.3
TRIM40-205ENST00000307859 TEX33O43247 280 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 OFD1O75665 1012 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 SKILP12757 684 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.3
TRIM40-205ENST00000307859 MTMR1Q13613 665 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 ITIH6Q6UXX5 1313 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 C17orf53Q8N3J3 647 aaPredicted RBP13.21□□□□□ -0.3
TRIM40-205ENST00000307859 CSGALNACT2Q8N6G5 542 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 DYDC2Q96IM9 177 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 SRRTQ9BXP5 876 aaKnown RBP13.21□□□□□ -0.3
TRIM40-205ENST00000307859 ELP3Q9H9T3 547 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 KCNH4Q9UQ05 1017 aa13.21□□□□□ -0.3
TRIM40-205ENST00000307859 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 IRF6O14896 467 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 CHMP2AO43633 222 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 KCNJ6P48051 423 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 LRRC63Q05C16 580 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 ITGB3BPQ13352 177 aaPredicted RBP13.2□□□□□ -0.3
TRIM40-205ENST00000307859 PPIL2Q13356 520 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 GIT2Q14161 759 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 CTTNQ14247 550 aaKnown RBP13.2□□□□□ -0.3
TRIM40-205ENST00000307859 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 LBX2Q6XYB7 198 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 FAM114A1Q8IWE2 563 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 MYOCDQ8IZQ8 938 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 MB21D1Q8N884 522 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
TRIM40-205ENST00000307859 CYP39A1Q9NYL5 469 aa13.2□□□□□ -0.3
TRIM40-205ENST00000307859 CCND2P30279 289 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 ZCWPW2Q504Y3 356 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
TRIM40-205ENST00000307859 MOB2Q70IA6 237 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 VSIG10LQ86VR7 867 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
TRIM40-205ENST00000307859 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 BHMT2Q9H2M3 363 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 KCND1Q9NSA2 647 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 TBC1D22BQ9NU19 505 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 TAB2Q9NYJ8 693 aa13.19□□□□□ -0.3
TRIM40-205ENST00000307859 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
TRIM40-205ENST00000307859 LGALS16A8MUM7 142 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 N4BP3O15049 544 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
TRIM40-205ENST00000307859 NR3C2P08235 984 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 MYCLP12524 364 aaPredicted RBP13.18□□□□□ -0.3
TRIM40-205ENST00000307859 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 ARMC9Q7Z3E5 817 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 TPH2Q8IWU9 490 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 NSUN6Q8TEA1 469 aaKnown RBP13.18□□□□□ -0.3
TRIM40-205ENST00000307859 GPRASP2Q96D09 838 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 NACC1Q96RE7 527 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 RUSC1Q9BVN2 902 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 VPS16Q9H269 839 aa13.18□□□□□ -0.3
TRIM40-205ENST00000307859 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
TRIM40-205ENST00000307859 MCM3APO60318 1980 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 NRDCO43847 1150 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 MOGSQ13724 837 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 TTLL12Q14166 644 aaPredicted RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 PLS1Q14651 629 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 LRRC41Q15345 812 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 RINT1Q6NUQ1 792 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 C1orf186Q6ZWK4 172 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 MIER3Q7Z3K6 550 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 TC2NQ8N9U0 490 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 CNOT6LQ96LI5 555 aaKnown RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 INPP4AQ96PE3 977 aaPredicted RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 LXNQ9BS40 222 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 FGFBP2Q9BYJ0 223 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 PLXNA1Q9UIW2 1896 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 DDX39AO00148 427 aaKnown RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 GPR25O00155 361 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 STAM2O75886 525 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 KIF20AO95235 890 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 FKBP1BP68106 108 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 EPM2AIP1Q7L775 607 aaPredicted RBP13.17□□□□□ -0.3
TRIM40-205ENST00000307859 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms