RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 C8orf37Q96NL8 207 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 CC2D2AQ9P2K1 1620 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 SUPT3HB4E1H0 165 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 KLHL18O94889 574 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 PFKFB1P16118 471 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 BFSP2Q13515 415 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 KRT72Q14CN4 511 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ARHGAP17Q68EM7 881 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 GCNAQ96QF7 691 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 KIAA1468Q9P260 1216 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 DCTN4Q9UJW0 460 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ANKRD36BQ8N2N9 1353 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 IL16Q14005 1332 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ZCWPW1Q9H0M4 648 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF233A6NK53 670 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 GFM2Q969S9 779 aaKnown RBP14.35□□□□□ -0.11
TRIM56-201ENST00000306085 CASKIN1Q8WXD9 1431 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 EPM2AIP1Q7L775 607 aaPredicted RBP14.35□□□□□ -0.11
TRIM56-201ENST00000306085 E5RI56 91 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 SLITRK6Q9H5Y7 841 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 RCSD1Q6JBY9 416 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 COPEO14579 308 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 AP1B1Q10567 949 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 RNF219Q5W0B1 726 aaPredicted RBP14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ANKRD49Q8WVL7 239 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 PPP1R36Q96LQ0 422 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ZWILCHQ9H900 591 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 GNPATO15228 680 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ATP5HO75947 161 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ADCY2Q08462 1091 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 STXBP2Q15833 593 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 CMTR1Q8N1G2 835 aaKnown RBP14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ECT2Q9H8V3 914 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ASAP2O43150 1006 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 GADL1Q6ZQY3 521 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 SIX6OS1Q8N1H7 587 aa14.35□□□□□ -0.11
TRIM56-201ENST00000306085 CNOT6LQ96LI5 555 aaKnown RBP14.35□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF445P59923 1031 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 TRIP4Q15650 581 aaPredicted RBP14.34□□□□□ -0.11
TRIM56-201ENST00000306085 SLC44A4Q53GD3 710 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 STOML1Q9UBI4 398 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 WDR7Q9Y4E6 1490 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 NFIBO00712 420 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 TBC1D4O60343 1298 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 ACTN3Q08043 901 aaPredicted RBP14.34□□□□□ -0.11
TRIM56-201ENST00000306085 CDO1Q16878 200 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 NT5C1BQ96P26 610 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 GGA1Q9UJY5 639 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 JAK2O60674 1132 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 MAPKAPK5Q8IW41 473 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 PSMD7P51665 324 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 DEFA1P59665 94 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 DEFA3P59666 94 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 TFAMQ00059 246 aaKnown RBP14.34□□□□□ -0.11
TRIM56-201ENST00000306085 AOC3Q16853 763 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 RNF139Q8WU17 664 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 FAF2Q96CS3 445 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 AP1M1Q9BXS5 423 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 RAD23BP54727 409 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 DDIASQ8IXT1 998 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 FHDC1Q9C0D6 1143 aaPredicted RBP14.34□□□□□ -0.11
TRIM56-201ENST00000306085 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 FAM47EQ6ZV65 393 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 STAG2Q8N3U4 1231 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 ARHGAP45Q92619 1136 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 FANCLQ9NW38 375 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 PKD2L2Q9NZM6 624 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 DLGAP3O95886 979 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 FTCDO95954 541 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 COPS2P61201 443 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 SUPT20HQ8NEM7 779 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 LRFN2Q9ULH4 789 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 CCNYL1Q8N7R7 359 aa14.34□□□□□ -0.11
TRIM56-201ENST00000306085 CFAP69A5D8W1 941 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 GOLGA8MH3BSY2 632 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 MED7O43513 233 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 CASP14P31944 242 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 WDR75Q8IWA0 830 aaKnown RBP14.33□□□□□ -0.11
TRIM56-201ENST00000306085 TEX2Q8IWB9 1127 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 NLRP4Q96MN2 994 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 USP28Q96RU2 1077 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 KDM4CQ9H3R0 1056 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.33□□□□□ -0.11
TRIM56-201ENST00000306085 AFF4Q9UHB7 1163 aaKnown RBP14.33□□□□□ -0.11
TRIM56-201ENST00000306085 PLAAQ9Y263 795 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 RASA4BC9J798 803 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 RASA4O43374 803 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 SULF1Q8IWU6 871 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 OPTNQ96CV9 577 aa14.33□□□□□ -0.11
TRIM56-201ENST00000306085 PLEKHG3A1L390 1219 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 HIBADHP31937 336 aaKnown RBP14.33□□□□□ -0.12
TRIM56-201ENST00000306085 MAGEA9P43362 315 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 RUNX1T1Q06455 604 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 CHMP1BQ7LBR1 199 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 PDIK1LQ8N165 341 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms