RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 NYAP1Q6ZVC0 841 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 DHX40Q8IX18 779 aaKnown RBP6.94□□□□□ -1.3
SCAPER-201ENST00000303521 P3H4Q92791 437 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 FAM84BQ96KN1 310 aaPredicted RBP6.94□□□□□ -1.3
SCAPER-201ENST00000303521 RABEP2Q9H5N1 569 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 PPANQ9NQ55 473 aaKnown RBP6.94□□□□□ -1.3
SCAPER-201ENST00000303521 USP27XA6NNY8 438 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 HIP1RO75146 1068 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 FAM13AO94988 1023 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 PSAPP07602 524 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 CTNNA1P35221 906 aaKnown RBP6.94□□□□□ -1.3
SCAPER-201ENST00000303521 MCAMP43121 646 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 MAGEA1P43355 309 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 SCRN1Q12765 414 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 MORC3Q14149 939 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 E2F4Q16254 413 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 EMBQ6PCB8 327 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 HAUS6Q7Z4H7 955 aa6.94□□□□□ -1.3
SCAPER-201ENST00000303521 MSL3Q8N5Y2 521 aaKnown RBP6.94□□□□□ -1.3
SCAPER-201ENST00000303521 EPN1Q9Y6I3 576 aaPredicted RBP6.94□□□□□ -1.3
SCAPER-201ENST00000303521 LRRD1A4D1F6 860 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 ARHGEF35A5YM69 484 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 HMGB1P1B2RPK0 211 aaPredicted RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 IRX1P78414 480 aaPredicted RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CCZ1BP86790 482 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CCZ1P86791 482 aaPredicted RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 LAMC2Q13753 1193 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PPP1R7Q15435 360 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CRY2Q49AN0 593 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 LRRC24Q50LG9 513 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PRAMEF18Q5VWM3 479 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 DTHD1Q6ZMT9 781 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CCDC84Q86UT8 332 aaPredicted RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 SLFN12Q8IYM2 578 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CCDC63Q8NA47 563 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CCDC197Q8NCU1 140 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 NSUN7Q8NE18 718 aaKnown RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 WDR11Q9BZH6 1224 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 MAP3K20Q9NYL2 800 aaKnown RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 C10orf71Q711Q0 1435 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 ATP2A1O14983 1001 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 GAS7O60861 476 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PTGER2P43116 358 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PTPN12Q05209 780 aaKnown RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PTPAQ15257 358 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 DIXDC1Q155Q3 683 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 ASIC2Q16515 512 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 ADCK5Q3MIX3 580 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 SEL1L2Q5TEA6 688 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 DIS3L2Q8IYB7 885 aaKnown RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CSGALNACT2Q8N6G5 542 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 DEPTORQ8TB45 409 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 XPNPEP3Q9NQH7 507 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PCDHB12Q9Y5F1 795 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 TARSL2A2RTX5 802 aaKnown RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 DGKDQ16760 1214 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 LINC00301Q8NCQ3 95 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 MTG1Q9BT17 334 aaPredicted RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 TRIM4Q9C037 500 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 MAF1Q9H063 256 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 KCNK9Q9NPC2 374 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 LARSQ9P2J5 1176 aaKnown RBP6.93□□□□□ -1.3
SCAPER-201ENST00000303521 AKT3Q9Y243 479 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CLIC4Q9Y696 253 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 ZNF541Q9H0D2 1346 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 A0A0D9SFI3 127 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 SPDYE5A6NIY4 337 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CSF1RP07333 972 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CAP2P40123 477 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CDC42EP5Q6NZY7 148 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PHLDB2Q86SQ0 1253 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 GBP5Q96PP8 586 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 CXorf56Q9H5V9 222 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 PSTPIP2Q9H939 334 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 TMEM51Q9NW97 253 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 POLLQ9UGP5 575 aa6.93□□□□□ -1.3
SCAPER-201ENST00000303521 SALL3Q9BXA9 1300 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 TLDC2A0PJX2 215 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 TYW5A2RUC4 315 aaKnown RBP6.92□□□□□ -1.3
SCAPER-201ENST00000303521 NDC80O14777 642 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 SLC10A3P09131 477 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 CDK8P49336 464 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 ATP1A2P50993 1020 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 RBL2Q08999 1139 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 RPS6KA1Q15418 735 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 KRT71Q3SY84 523 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 LONRF3Q496Y0 759 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 GLE1Q53GS7 698 aaKnown RBP6.92□□□□□ -1.3
SCAPER-201ENST00000303521 DENND2CQ68D51 928 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 FBXO33Q7Z6M2 555 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 IFNL1Q8IU54 200 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 C7orf61Q8IZ16 206 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 WHAMMQ8TF30 809 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 USP44Q9H0E7 712 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 VCPKMTQ9H867 229 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 NYAP2Q9P242 653 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 KDM3BQ7LBC6 1761 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 LAMA4Q16363 1823 aa6.92□□□□□ -1.3
SCAPER-201ENST00000303521 LOC102724159A0A0B4J2E5 919 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms