RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZBED6P86452 979 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 ATG4CQ96DT6 458 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 CCDC42Q96M95 316 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 TAAR1Q96RJ0 339 aa16.1■□□□□ 0.17
SMG8-201ENST00000300917 LSM14BQ9BX40 385 aaKnown RBP16.1■□□□□ 0.17
SMG8-201ENST00000300917 TBX3O15119 743 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 FAM13AO94988 1023 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 IPO7O95373 1038 aaKnown RBP16.09■□□□□ 0.17
SMG8-201ENST00000300917 ACTN1P12814 892 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 CASP4P49662 377 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 HMGCS2P54868 508 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 TNFAIP1Q13829 316 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 ZCWPW2Q504Y3 356 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 FKBP1CQ5VVH2 108 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 RINT1Q6NUQ1 792 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 MTMR14Q8NCE2 650 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 TRPM4Q8TD43 1214 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 SIK3Q9Y2K2 1263 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 SRGAP2O75044 1071 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 PSMD10O75832 226 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 POLR2FP61218 127 aaKnown RBP16.09■□□□□ 0.17
SMG8-201ENST00000300917 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 RDH13Q8NBN7 331 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 RIPK3Q9Y572 518 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 MRFAP1Q9Y605 127 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 KCNMA1Q12791 1236 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 COG2Q14746 738 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 CAPZA3Q96KX2 299 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 ERGIC2Q96RQ1 377 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 KCTD10Q9H3F6 313 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
SMG8-201ENST00000300917 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.17
SMG8-201ENST00000300917 CTAGE9A4FU28 777 aa16.08■□□□□ 0.17
SMG8-201ENST00000300917 AKR1B10O60218 316 aa16.08■□□□□ 0.17
SMG8-201ENST00000300917 ICAM1P05362 532 aa16.08■□□□□ 0.17
SMG8-201ENST00000300917 HOXD13P35453 343 aa16.08■□□□□ 0.17
SMG8-201ENST00000300917 EIF4A3P38919 411 aaKnown RBP16.08■□□□□ 0.17
SMG8-201ENST00000300917 PTGER2P43116 358 aa16.08■□□□□ 0.17
SMG8-201ENST00000300917 RPS6P62753 249 aaKnown RBP16.08■□□□□ 0.17
SMG8-201ENST00000300917 DNAAF5Q86Y56 855 aa16.08■□□□□ 0.17
SMG8-201ENST00000300917 LXNQ9BS40 222 aa16.08■□□□□ 0.17
SMG8-201ENST00000300917 CYP3A4P08684 503 aa16.08■□□□□ 0.16
SMG8-201ENST00000300917 DNA2P51530 1060 aa16.08■□□□□ 0.16
SMG8-201ENST00000300917 ARHGAP27Q6ZUM4 889 aa16.08■□□□□ 0.16
SMG8-201ENST00000300917 JAKMIP2Q96AA8 810 aa16.08■□□□□ 0.16
SMG8-201ENST00000300917 PSMB7Q99436 277 aa16.08■□□□□ 0.16
SMG8-201ENST00000300917 HSD17B14Q9BPX1 270 aa16.08■□□□□ 0.16
SMG8-201ENST00000300917 ARHGAP20Q9P2F6 1191 aa16.08■□□□□ 0.16
SMG8-201ENST00000300917 CGNQ9P2M7 1197 aaKnown RBP16.08■□□□□ 0.16
SMG8-201ENST00000300917 CETN3O15182 167 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 TADA3O75528 432 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 SEC31AO94979 1220 aaKnown RBP16.07■□□□□ 0.16
SMG8-201ENST00000300917 UTP14CQ5TAP6 766 aaKnown RBP16.07■□□□□ 0.16
SMG8-201ENST00000300917 HINFPQ9BQA5 517 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 NUP58Q9BVL2 599 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 ZNF263O14978 683 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 EYA4O95677 639 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 MTERF4Q7Z6M4 381 aaKnown RBP16.07■□□□□ 0.16
SMG8-201ENST00000300917 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
SMG8-201ENST00000300917 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMG8-201ENST00000300917 CYLC1P35663 651 aaPredicted RBP16.07■□□□□ 0.16
SMG8-201ENST00000300917 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 RAPGEF1Q13905 1077 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 MCTP2Q6DN12 878 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 TEKT3Q9BXF9 490 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 GGA3Q9NZ52 723 aa16.07■□□□□ 0.16
SMG8-201ENST00000300917 TUBB4AP04350 444 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 FECHP22830 423 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 COBLL1Q53SF7 1204 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 MIER3Q7Z3K6 550 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 MXRA8Q9BRK3 442 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 CYP2J2P51589 502 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 GFPT1Q06210 699 aaPredicted RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 KCNH2Q12809 1159 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 SLC5A5Q92911 643 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 NAPGQ99747 312 aaPredicted RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 GTPBP4Q9BZE4 634 aaKnown RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 EHMT1Q9H9B1 1298 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 COL2A1P02458 1487 aaPredicted RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 AKAP3O75969 853 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 RHOXF2BP0C7M4 288 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 PNMA6AP0CW24 399 aaPredicted RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 SLC9A1P19634 815 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 MRPS9P82933 396 aaKnown RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 SPA17Q15506 151 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
SMG8-201ENST00000300917 RHOXF2Q9BQY4 288 aa16.06■□□□□ 0.16
SMG8-201ENST00000300917 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMG8-201ENST00000300917 TISP43B9A030 160 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 ATP9AO75110 1047 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 CLCN6P51797 869 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms