RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 MTF1Q14872 753 aa23.71■■□□□ 1.39
SOX17-201ENST00000297316 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
SOX17-201ENST00000297316 REXO1L1PQ8IX06 675 aa23.71■■□□□ 1.39
SOX17-201ENST00000297316 SYT2Q8N9I0 419 aaPredicted RBP23.71■■□□□ 1.39
SOX17-201ENST00000297316 BANK1Q8NDB2 785 aa23.71■■□□□ 1.39
SOX17-201ENST00000297316 ZNF507Q8TCN5 953 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 NOC3LQ8WTT2 800 aaKnown RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 CNOT6LQ96LI5 555 aaKnown RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 PANX2Q96RD6 677 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 RIT2Q99578 217 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 PAGR1Q9BTK6 254 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 RUSC1Q9BVN2 902 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 ASCC2Q9H1I8 757 aaPredicted RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 KRT18P05783 430 aaKnown RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 NR3C2P08235 984 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 HOXA7P31268 230 aaPredicted RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 PPP1R2P41236 205 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 MOGSQ13724 837 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 NIPA1Q7RTP0 329 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 ARMC9Q7Z3E5 817 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 GUF1Q8N442 669 aaKnown RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 PROCA1Q8NCQ7 364 aaPredicted RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 GTPBP4Q9BZE4 634 aaKnown RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 ZHX3Q9H4I2 956 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 BMP2KQ9NSY1 1161 aaPredicted RBP23.7■■□□□ 1.38
SOX17-201ENST00000297316 KCNH4Q9UQ05 1017 aa23.7■■□□□ 1.38
SOX17-201ENST00000297316 SOWAHDA6NJG2 315 aa23.69■■□□□ 1.38
SOX17-201ENST00000297316 CXCL11O14625 94 aa23.69■■□□□ 1.38
SOX17-201ENST00000297316 PPIL2Q13356 520 aa23.69■■□□□ 1.38
SOX17-201ENST00000297316 MB21D1Q8N884 522 aa23.69■■□□□ 1.38
SOX17-201ENST00000297316 MAGEC2Q9UBF1 373 aaPredicted RBP23.69■■□□□ 1.38
SOX17-201ENST00000297316 B4DLN1 442 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 IRX3P78415 501 aaPredicted RBP23.68■■□□□ 1.38
SOX17-201ENST00000297316 GIT2Q14161 759 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 MTERF4Q7Z6M4 381 aaKnown RBP23.68■■□□□ 1.38
SOX17-201ENST00000297316 VSIG10LQ86VR7 867 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 REEP2Q9BRK0 252 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 TUBGCP2Q9BSJ2 902 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 TUFT1Q9NNX1 390 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 STK24Q9Y6E0 443 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 RSPH10B2B2RC85 870 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 RSPH10BP0C881 870 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 CNTN2Q02246 1040 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 DESI2Q9BSY9 194 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 PPP2R2CQ9Y2T4 447 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 PCDHA2Q9Y5H9 948 aa23.68■■□□□ 1.38
SOX17-201ENST00000297316 PES1O00541 588 aaKnown RBP23.67■■□□□ 1.38
SOX17-201ENST00000297316 EYA4O95677 639 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 GTF2F1P35269 517 aaKnown RBP eCLIP23.67■■□□□ 1.38
SOX17-201ENST00000297316 FSTL1Q12841 308 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 EPHA7Q15375 998 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 HERC4Q5GLZ8 1057 aaPredicted RBP23.67■■□□□ 1.38
SOX17-201ENST00000297316 FAM26FQ5R3K3 315 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 LDLRAD1Q5T700 205 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 RAD9BQ6WBX8 426 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 LXNQ9BS40 222 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 RGS20O76081 388 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 HERVK_113P62684 666 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 PSMD2Q13200 908 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 MIER3Q7Z3K6 550 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 ASTN1O14525 1302 aa23.67■■□□□ 1.38
SOX17-201ENST00000297316 CCND2P30279 289 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 MIIPQ5JXC2 388 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 CCDC65Q8IXS2 484 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 NSUN6Q8TEA1 469 aaKnown RBP23.66■■□□□ 1.38
SOX17-201ENST00000297316 RRAGCQ9HB90 399 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 TXNRD2Q9NNW7 524 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 AGTPBP1Q9UPW5 1226 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.66■■□□□ 1.38
SOX17-201ENST00000297316 CNMDO75829 334 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 SPATC1LQ9H0A9 340 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 SAMM50Q9Y512 469 aa23.66■■□□□ 1.38
SOX17-201ENST00000297316 FRMD3A2A2Y4 597 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 MKRN3Q13064 507 aaKnown RBP23.65■■□□□ 1.38
SOX17-201ENST00000297316 RINT1Q6NUQ1 792 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 ANKRD35Q8N283 1001 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 TELO2Q9Y4R8 837 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 PAXBP1Q9Y5B6 917 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 SFI1A8K8P3 1242 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 KLK7P49862 253 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 CASP5P51878 434 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 GPAT2Q6NUI2 795 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 SYT10Q6XYQ8 523 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 LRRC55Q6ZSA7 311 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 CNGA4Q8IV77 575 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 MYOCDQ8IZQ8 938 aa23.65■■□□□ 1.38
SOX17-201ENST00000297316 WDR81Q562E7 1941 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 FANCGO15287 622 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 SORBS3O60504 671 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 CCNE2O96020 404 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 MTIF2P46199 727 aaKnown RBP23.64■■□□□ 1.38
SOX17-201ENST00000297316 ZCWPW2Q504Y3 356 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 TRIM65Q6PJ69 517 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 RIOX2Q8IUF8 465 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 SLC10A4Q96EP9 437 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 ABHD10Q9NUJ1 306 aa23.64■■□□□ 1.38
SOX17-201ENST00000297316 A0A1W2PQC6 194 aa23.64■■□□□ 1.37
SOX17-201ENST00000297316 RASSF10A6NK89 507 aa23.64■■□□□ 1.37
SOX17-201ENST00000297316 FECHP22830 423 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms