RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 INTUQ9ULD6 942 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 WDR91A4D1P6 747 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 ATP2B4P23634 1241 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 ABCD1P33897 745 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 GTF2IP78347 998 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 RSBN1LQ6PCB5 846 aaPredicted RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 SPATA4Q8NEY3 305 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 FAM96AQ9H5X1 160 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 HDAC6Q9UBN7 1215 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 ZFP69BQ9UJL9 534 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 PFDN6O15212 129 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 EIF3HO15372 352 aaKnown RBP eCLIP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 SAT1P21673 171 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 PDE6BP35913 854 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 ALCAMQ13740 583 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 BBS9Q3SYG4 887 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 ARHGEF16Q5VV41 709 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 TTC25Q96NG3 672 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 SH3GL3Q99963 347 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 PARVGQ9HBI0 331 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 GINS2Q9Y248 185 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 CAPN9O14815 690 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 KRT37O76014 449 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 ATP1A1P05023 1023 aaKnown RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 ART3Q13508 389 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 BRDTQ58F21 947 aaPredicted RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 RAPH1Q70E73 1250 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 EPM2AIP1Q7L775 607 aaPredicted RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 LRRC43Q8N309 656 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 GLG1Q92896 1179 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 CCDC138Q96M89 665 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 PIGSQ96S52 555 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 EDEM3Q9BZQ6 932 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 IPO11Q9UI26 975 aaKnown RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 A0A0G2JND7 137 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 RASSF10A6NK89 507 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 PRPSAP1Q14558 356 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 WDR75Q8IWA0 830 aaKnown RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 ECT2Q9H8V3 914 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 HAUS5O94927 633 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 MDH1P40925 334 aaKnown RBP11.87□□□□□ -0.51
PBRM1-201ENST00000296302 FAM47EQ6ZV65 393 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 OLFM3Q96PB7 478 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 CCDC68Q9H2F9 335 aa11.87□□□□□ -0.51
PBRM1-201ENST00000296302 TTLL1O95922 423 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 CHRNA3P32297 505 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 PI16Q6UXB8 463 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 STRBPQ96SI9 672 aaKnown RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 CYTH2Q99418 400 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 CAPN11Q9UMQ6 739 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 REREQ9P2R6 1566 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 TMEM2Q9UHN6 1383 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 ESYT3A0FGR9 886 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 TRIM66O15016 1216 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 MMS19Q96T76 1030 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 MRPL46Q9H2W6 279 aaKnown RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 PPARGC1AQ9UBK2 798 aaKnown RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 TLK1Q9UKI8 766 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 HSPA8P11142 646 aaKnown RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 LLGL1Q15334 1064 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 DARS2Q6PI48 645 aaKnown RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 UPF3AQ9H1J1 476 aaKnown RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 SAYSD1Q9NPB0 183 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 NCF2P19878 526 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 POLGP54098 1239 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 DYNLL1P63167 89 aaKnown RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 SHC4Q6S5L8 630 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 RAB44Q7Z6P3 723 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 DGKHQ86XP1 1220 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-201ENST00000296302 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 SNX12Q9UMY4 172 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 ORC6Q9Y5N6 252 aa11.86□□□□□ -0.51
PBRM1-201ENST00000296302 LRRIQ4A6NIV6 560 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 PDHA1P08559 390 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 SRGAP2BP0DMP2 458 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ALAS1P13196 640 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 DDIT3P35638 169 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 IRX1P78414 480 aaPredicted RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 CDR2Q01850 454 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 GUCY1A3Q02108 690 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 RASGRP2Q7LDG7 609 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 SRRM1Q8IYB3 904 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 MORC4Q8TE76 937 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ATP6V0A1Q93050 837 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 TRIM56Q9BRZ2 755 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ZNF804BA4D1E1 1349 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms