RNA–Protein interactions for RNA: ENST00000294543.10

TMCO4-201, Transcript of transmembrane and coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO4, Length 2,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-201ENST00000294543 SLIT2O94813 1529 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 NKRFO15226 690 aaKnown RBP eCLIP11.99□□□□□ -0.49
TMCO4-201ENST00000294543 ASAP2O43150 1006 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 ECHS1P30084 290 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 CUL1Q13616 776 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 SEPT2Q15019 361 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 PUM3Q15397 648 aaKnown RBP11.99□□□□□ -0.49
TMCO4-201ENST00000294543 AKNAD1Q5T1N1 836 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 ANO7Q6IWH7 933 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 LONP2Q86WA8 852 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 USP38Q8NB14 1042 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 PLA2G12BQ9BX93 195 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 DDX47Q9H0S4 455 aaKnown RBP11.99□□□□□ -0.49
TMCO4-201ENST00000294543 KCNMB3Q9NPA1 279 aa11.99□□□□□ -0.49
TMCO4-201ENST00000294543 CEP104O60308 925 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 PDE8AO60658 829 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 CDK17Q00537 523 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 RNF220Q5VTB9 566 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 SUSD4Q5VX71 490 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 NUGGCQ68CJ6 796 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 MTHFD1LQ6UB35 978 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 FBF1Q8TES7 1133 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 SYT15Q9BQS2 421 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 NSRP1Q9H0G5 558 aaKnown RBP11.98□□□□□ -0.49
TMCO4-201ENST00000294543 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 BCL9LQ86UU0 1499 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 ALDH3A1P30838 453 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 PIGWQ7Z7B1 504 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 DYDC1Q8WWB3 177 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 IFT74Q96LB3 600 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 RPS6KC1Q96S38 1066 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 DLGAP2Q9P1A6 1054 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
TMCO4-201ENST00000294543 LIFRP42702 1097 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 RAD23BP54727 409 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 MRPS35P82673 323 aaKnown RBP11.97□□□□□ -0.49
TMCO4-201ENST00000294543 EVX2Q03828 476 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 BARGINQ6ZT62 677 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 ADGRA1Q86SQ6 560 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 RBM41Q96IZ5 413 aaKnown RBP11.97□□□□□ -0.49
TMCO4-201ENST00000294543 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 ZMYND8Q9ULU4 1186 aaPredicted RBP11.97□□□□□ -0.49
TMCO4-201ENST00000294543 GRID2IPA4D2P6 1211 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 RFC5P40937 340 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 COPS2P61201 443 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 ARID5AQ03989 594 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 ZNF34Q8IZ26 560 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 STAG2Q8N3U4 1231 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 INPP4AQ96PE3 977 aaPredicted RBP11.97□□□□□ -0.49
TMCO4-201ENST00000294543 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.97□□□□□ -0.49
TMCO4-201ENST00000294543 GOLPH3Q9H4A6 298 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 AMACRQ9UHK6 382 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 MYH2Q9UKX2 1941 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 BMP15O95972 392 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 SLC5A1P13866 664 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 CNGA1P29973 690 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 GBP1P32455 592 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 ADAM9Q13443 819 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 TTI2Q6NXR4 508 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 UHMK1Q8TAS1 419 aaKnown RBP11.97□□□□□ -0.49
TMCO4-201ENST00000294543 MGARPQ8TDB4 240 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 NLRC4Q9NPP4 1024 aa11.97□□□□□ -0.49
TMCO4-201ENST00000294543 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 F8VZ95 297 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 H0Y3Z8 333 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 PPFIA2O75334 1257 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 UQCRFS1P1P0C7P4 283 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 KLRC1P26715 233 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 TMC3Q7Z5M5 1100 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 FAM114A1Q8IWE2 563 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 RNF10Q8N5U6 811 aaKnown RBP11.96□□□□□ -0.49
TMCO4-201ENST00000294543 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.96□□□□□ -0.499e-10■■■■■ 79.8
TMCO4-201ENST00000294543 RAB17Q9H0T7 212 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 WDR35Q9P2L0 1181 aa11.96□□□□□ -0.49
TMCO4-201ENST00000294543 A0A1W2PQJ5 194 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 CYP7A1P22680 504 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 SCNN1BP51168 640 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 CCDC38Q502W7 563 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 MIIPQ5JXC2 388 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 HOOK3Q86VS8 718 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 FANCBQ8NB91 859 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 SHISA4Q96DD7 197 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 DUSP9Q99956 384 aaKnown RBP11.96□□□□□ -0.5
TMCO4-201ENST00000294543 PICK1Q9NRD5 415 aa11.96□□□□□ -0.5
TMCO4-201ENST00000294543 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.5
TMCO4-201ENST00000294543 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 GYG1P46976 350 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 ZNF131P52739 623 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 KLC1Q07866 573 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 LRRC14Q15048 493 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 PIK3AP1Q6ZUJ8 805 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 ZNF654Q8IZM8 581 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 ATXN2LQ8WWM7 1075 aaKnown RBP11.95□□□□□ -0.5
TMCO4-201ENST00000294543 CENPTQ96BT3 561 aa11.95□□□□□ -0.5
TMCO4-201ENST00000294543 TANGO6Q9C0B7 1094 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms