RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GLG1Q92896 1179 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 BRF1Q92994 677 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 ZBTB10Q96DT7 871 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 CCDC136Q96JN2 1154 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 SLC9A2Q9UBY0 812 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 NAP1L2Q9ULW6 460 aaPredicted RBP28.84■■■□□ 2.21
U2AF1-201ENST00000291552 ATG2AQ2TAZ0 1938 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 RALGAPA2Q2PPJ7 1873 aa28.83■■■□□ 2.21
U2AF1-201ENST00000291552 PFKFB3Q16875 520 aaPredicted RBP28.83■■■□□ 2.21
U2AF1-201ENST00000291552 CEP55Q53EZ4 464 aa28.83■■■□□ 2.21
U2AF1-201ENST00000291552 TGS1Q96RS0 853 aaKnown RBP28.83■■■□□ 2.21
U2AF1-201ENST00000291552 SMARCAD1Q9H4L7 1026 aa28.83■■■□□ 2.21
U2AF1-201ENST00000291552 SUGCTQ9HAC7 445 aa28.83■■■□□ 2.21
U2AF1-201ENST00000291552 TUBE1Q9UJT0 475 aa28.83■■■□□ 2.21
U2AF1-201ENST00000291552 NFASCO94856 1347 aa28.83■■■□□ 2.21
U2AF1-201ENST00000291552 AP3B2Q13367 1082 aa28.82■■■□□ 2.2
U2AF1-201ENST00000291552 ADAMTS19Q8TE59 1207 aa28.82■■■□□ 2.2
U2AF1-201ENST00000291552 AGO4Q9HCK5 861 aaKnown RBP28.82■■■□□ 2.2
U2AF1-201ENST00000291552 INSL6Q9Y581 213 aa28.82■■■□□ 2.2
U2AF1-201ENST00000291552 TTC3P53804 2025 aa28.81■■■□□ 2.2
U2AF1-201ENST00000291552 MEIS1O00470 390 aa28.81■■■□□ 2.2
U2AF1-201ENST00000291552 ACTR2P61160 394 aa28.81■■■□□ 2.2
U2AF1-201ENST00000291552 TAF2Q6P1X5 1199 aa28.81■■■□□ 2.2
U2AF1-201ENST00000291552 CRYGNQ8WXF5 182 aa28.81■■■□□ 2.2
U2AF1-201ENST00000291552 C17orf80Q9BSJ5 609 aa28.81■■■□□ 2.2
U2AF1-201ENST00000291552 AGXT2Q9BYV1 514 aa28.81■■■□□ 2.2
U2AF1-201ENST00000291552 IFIH1Q9BYX4 1025 aaKnown RBP28.81■■■□□ 2.2
U2AF1-201ENST00000291552 MYH9P35579 1960 aaKnown RBP28.81■■■□□ 2.2
U2AF1-201ENST00000291552 GHRP10912 638 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 SCG2P13521 617 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 RPS6KB1P23443 525 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 FGD1P98174 961 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 SKIV2LQ15477 1246 aaKnown RBP28.8■■■□□ 2.2
U2AF1-201ENST00000291552 PKN1Q16512 942 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 BLOC1S2Q6QNY1 142 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 TOP1MTQ969P6 601 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 TSPYL2Q9H2G4 693 aaPredicted RBP28.8■■■□□ 2.2
U2AF1-201ENST00000291552 EVPLQ92817 2033 aa28.8■■■□□ 2.2
U2AF1-201ENST00000291552 MYO7AQ13402 2215 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 INSRRP14616 1297 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 IGBP1P78318 339 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 LPIN1Q14693 890 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 JAKMIP3Q5VZ66 844 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 FBXL16Q8N461 479 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 DNAJB3Q8WWF6 145 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 APBB2Q92870 758 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 GLT8D2Q9H1C3 349 aa28.79■■■□□ 2.2
U2AF1-201ENST00000291552 FAM86B1E9PN63 330 aa28.78■■■□□ 2.2
U2AF1-201ENST00000291552 CCNE2O96020 404 aa28.78■■■□□ 2.2
U2AF1-201ENST00000291552 FAM86B2P0C5J1 330 aa28.78■■■□□ 2.2
U2AF1-201ENST00000291552 KCNQ1P51787 676 aa28.78■■■□□ 2.2
U2AF1-201ENST00000291552 PLCB4Q15147 1175 aa28.78■■■□□ 2.2
U2AF1-201ENST00000291552 TRAPPC12Q8WVT3 735 aa28.78■■■□□ 2.2
U2AF1-201ENST00000291552 SDF4Q9BRK5 362 aa28.78■■■□□ 2.2
U2AF1-201ENST00000291552 IGLV3-22A0A075B6J6 115 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 ESYT2A0FGR8 921 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 TNFRSF10AO00220 468 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 ATG7O95352 703 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 BMP1P13497 986 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 NIPA1Q7RTP0 329 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 ZMYND12Q9H0C1 365 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 LMCD1Q9NZU5 365 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 CDY2AQ9Y6F7 541 aa28.77■■■□□ 2.2
U2AF1-201ENST00000291552 CCDC196A0A1B0GTZ2 297 aa28.76■■■□□ 2.19
U2AF1-201ENST00000291552 UPP2O95045 317 aa28.76■■■□□ 2.19
U2AF1-201ENST00000291552 NTRK3Q16288 839 aa28.76■■■□□ 2.19
U2AF1-201ENST00000291552 FBXO47Q5MNV8 452 aa28.76■■■□□ 2.19
U2AF1-201ENST00000291552 PHKBQ93100 1093 aa28.76■■■□□ 2.19
U2AF1-201ENST00000291552 AZI2Q9H6S1 392 aa28.76■■■□□ 2.19
U2AF1-201ENST00000291552 KIAA1671Q9BY89 1806 aa28.76■■■□□ 2.19
U2AF1-201ENST00000291552 IGKV6D-21A0A0A0MT36 114 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 RRN3P2A6NIE6 340 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 PRPF3O43395 683 aaKnown RBP28.75■■■□□ 2.19
U2AF1-201ENST00000291552 PPFIA3O75145 1194 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 CYP3A4P08684 503 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 MRPS6P82932 125 aaKnown RBP28.75■■■□□ 2.19
U2AF1-201ENST00000291552 PLPPR4Q7Z2D5 763 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 FBXO22Q8NEZ5 403 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 NECAB3Q96P71 396 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-201ENST00000291552 UHRF1Q96T88 793 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-201ENST00000291552 YME1L1Q96TA2 773 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 FAM49AQ9H0Q0 323 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-201ENST00000291552 TRPC6Q9Y210 931 aa28.75■■■□□ 2.19
U2AF1-201ENST00000291552 DDX39AO00148 427 aaKnown RBP28.74■■■□□ 2.19
U2AF1-201ENST00000291552 DHX15O43143 795 aaKnown RBP28.74■■■□□ 2.19
U2AF1-201ENST00000291552 STAT5BP51692 787 aa28.74■■■□□ 2.19
U2AF1-201ENST00000291552 RSPH3Q86UC2 560 aa28.74■■■□□ 2.19
U2AF1-201ENST00000291552 PLA2G4DQ86XP0 818 aa28.74■■■□□ 2.19
U2AF1-201ENST00000291552 UIMC1Q96RL1 719 aa28.74■■■□□ 2.19
U2AF1-201ENST00000291552 AGO3Q9H9G7 860 aaKnown RBP28.74■■■□□ 2.19
U2AF1-201ENST00000291552 REC8O95072 547 aa28.73■■■□□ 2.19
U2AF1-201ENST00000291552 ZNF76P36508 570 aa28.73■■■□□ 2.19
U2AF1-201ENST00000291552 ABHD15Q6UXT9 468 aa28.73■■■□□ 2.19
U2AF1-201ENST00000291552 CCDC60Q8IWA6 550 aaPredicted RBP28.73■■■□□ 2.19
U2AF1-201ENST00000291552 RASGRP4Q8TDF6 673 aa28.73■■■□□ 2.19
U2AF1-201ENST00000291552 LINC01599Q8WXQ3 324 aa28.73■■■□□ 2.19
U2AF1-201ENST00000291552 RC3H2Q9HBD1 1191 aaKnown RBP28.73■■■□□ 2.19
U2AF1-201ENST00000291552 NCOA5Q9HCD5 579 aaKnown RBP28.73■■■□□ 2.19
U2AF1-201ENST00000291552 COG5Q9UP83 839 aa28.73■■■□□ 2.19
U2AF1-201ENST00000291552 EVCP57679 992 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms