RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PIGOQ8TEQ8 1089 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 APOL6Q9BWW8 343 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 MYL1P05976 194 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 MB21D2Q8IYB1 491 aaPredicted RBP16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 KCTD6Q8NC69 237 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 HDAC11Q96DB2 347 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 KITP10721 976 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 LMNB2Q03252 620 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 CDCA7Q9BWT1 371 aaPredicted RBP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 NOP53Q9NZM5 478 aaKnown RBP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 CALN1Q9BXU9 219 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 CFLARO15519 480 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 CA4P22748 312 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 ARHGAP4P98171 946 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 BBS9Q3SYG4 887 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 PPP1R16BQ96T49 567 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 DDX47Q9H0S4 455 aaKnown RBP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 SAYSD1Q9NPB0 183 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 ARMC9Q7Z3E5 817 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 METTL16Q86W50 562 aaKnown RBP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 PITPNM3Q9BZ71 974 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 CLTCL1P53675 1640 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 ESRRAP11474 423 aaPredicted RBP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 OSTNP61366 133 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 LRRC63Q05C16 580 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 FMR1Q06787 632 aaKnown RBP eCLIP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 FBXW10Q5XX13 1052 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 ZC3H18Q86VM9 953 aaKnown RBP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 HSPH1Q92598 858 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 CDKL2Q92772 493 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 PPWD1Q96BP3 646 aaKnown RBP16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 ECT2Q9H8V3 914 aa16.54■□□□□ 0.24
SHROOM4-201ENST00000289292 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 SEMA3EO15041 775 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 ABL1P00519 1130 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 EIF3BP55884 814 aaKnown RBP16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 GNPTABQ3T906 1256 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 CCDC117Q8IWD4 279 aaPredicted RBP16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 RNF169Q8NCN4 708 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 SH3BGRP55822 239 aaPredicted RBP16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 CHUKO15111 745 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 PSMD2Q13200 908 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 ANKRD7Q92527 254 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 CEP72Q9P209 647 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 HLFQ16534 295 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 RFX8Q6ZV50 586 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 SH3RF3Q8TEJ3 882 aaPredicted RBP16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 DEPDC1BQ8WUY9 529 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 NLRP7Q8WX94 980 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 RIN2Q8WYP3 895 aaPredicted RBP16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 DNAJC12Q9UKB3 198 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 CCDC195A0A1B0GUA6 201 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 GMNCA6NCL1 334 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 MCF2LO15068 1137 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 TOM1O60784 492 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 SUPT20HQ8NEM7 779 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 LRRC1Q9BTT6 524 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 SMARCAL1Q9NZC9 954 aa16.53■□□□□ 0.24
SHROOM4-201ENST00000289292 MAPK13O15264 365 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 PMS2P54278 862 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 PASD1Q8IV76 773 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 TTC17Q96AE7 1141 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 FCER1AP12319 257 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 POLR2BP30876 1174 aaKnown RBP16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 PPP2R2AP63151 447 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 DYDC2Q96IM9 177 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 ZFYVE16Q7Z3T8 1539 aa16.52■□□□□ 0.24
SHROOM4-201ENST00000289292 AOC3Q16853 763 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 DNAJC24Q6P3W2 148 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 PARP9Q8IXQ6 854 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 HPS3Q969F9 1004 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 PARVGQ9HBI0 331 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 SLC4A7Q9Y6M7 1214 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 E9PMD0 336 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 LOC102724428A0A0B4J2F2 783 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 SSTR3P32745 418 aaPredicted RBP16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 SIK1P57059 783 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 ARL6IP4Q66PJ3 421 aaKnown RBP16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 CCNYQ8ND76 341 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 NXF1Q9UBU9 619 aaKnown RBP16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 NOD1Q9Y239 953 aa16.52■□□□□ 0.23
SHROOM4-201ENST00000289292 USP17L5A8MUK1 530 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 CDK8P49336 464 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SLC12A1Q13621 1099 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 CHP1Q99653 195 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 BHMT2Q9H2M3 363 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 ATG3Q9NT62 314 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 PREX2Q70Z35 1606 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SKIP12755 728 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SRLQ86TD4 932 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 HESX1Q9UBX0 185 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms