RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 RWDD3Q9Y3V2 267 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 V9GY48 417 aaPredicted RBP16.03■□□□□ 0.16
TPM1-202ENST00000288398 DOCK5Q9H7D0 1870 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 MICAL3Q7RTP6 2002 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 CHRNA1P02708 482 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 CTNNB1P35222 781 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 MRPS6P82932 125 aaKnown RBP16.02■□□□□ 0.16
TPM1-202ENST00000288398 AP3B2Q13367 1082 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
TPM1-202ENST00000288398 TCEANC2Q96MN5 208 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 ANO3Q9BYT9 981 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 CDY2AQ9Y6F7 541 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 SIP14410 1827 aa16.02■□□□□ 0.16
TPM1-202ENST00000288398 NFASCO94856 1347 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.01■□□□□ 0.15
TPM1-202ENST00000288398 H3BNC9 293 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 BACH1O14867 736 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 INSRRP14616 1297 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 KCNA5P22460 613 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 STAT5BP51692 787 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 ACTR2P61160 394 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 LPIN1Q14693 890 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 CEP55Q53EZ4 464 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 TSHZ1Q6ZSZ6 1077 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 CCDC12Q8WUD4 166 aaPredicted RBP16.01■□□□□ 0.15
TPM1-202ENST00000288398 PGBD1Q96JS3 809 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 BARHL2Q9NY43 387 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 BDP1A6H8Y1 2624 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 KAT6AQ92794 2004 aa16.01■□□□□ 0.15
TPM1-202ENST00000288398 TCF20Q9UGU0 1960 aaKnown RBP16■□□□□ 0.15
TPM1-202ENST00000288398 MBLAC1A4D2B0 266 aaPredicted RBP16■□□□□ 0.15
TPM1-202ENST00000288398 SLC26A2P50443 739 aa16■□□□□ 0.15
TPM1-202ENST00000288398 METAP2P50579 478 aaKnown RBP eCLIP16■□□□□ 0.15
TPM1-202ENST00000288398 RCAN1P53805 252 aa16■□□□□ 0.15
TPM1-202ENST00000288398 EXOSC10Q01780 885 aaKnown RBP16■□□□□ 0.15
TPM1-202ENST00000288398 AKAP17AQ02040 695 aaKnown RBP16■□□□□ 0.15
TPM1-202ENST00000288398 COL9A3Q14050 684 aaPredicted RBP16■□□□□ 0.15
TPM1-202ENST00000288398 FBXO47Q5MNV8 452 aa16■□□□□ 0.15
TPM1-202ENST00000288398 MCTP2Q6DN12 878 aa16■□□□□ 0.15
TPM1-202ENST00000288398 BANK1Q8NDB2 785 aa16■□□□□ 0.15
TPM1-202ENST00000288398 C11orf84Q9BUA3 381 aaPredicted RBP16■□□□□ 0.15
TPM1-202ENST00000288398 FTHL17Q9BXU8 183 aa16■□□□□ 0.15
TPM1-202ENST00000288398 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
TPM1-202ENST00000288398 FAM50BQ9Y247 325 aa16■□□□□ 0.15
TPM1-202ENST00000288398 TRPV2Q9Y5S1 764 aa16■□□□□ 0.15
TPM1-202ENST00000288398 NCOR1O75376 2440 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 ADGRA3Q8IWK6 1321 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 POTEB3A0JP26 581 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
TPM1-202ENST00000288398 STXBP3O00186 592 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 SREBF1P36956 1147 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 MGAT3Q09327 533 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 PAK2Q13177 524 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 BTG3Q14201 252 aaPredicted RBP15.99■□□□□ 0.15
TPM1-202ENST00000288398 PUS10Q3MIT2 529 aaKnown RBP15.99■□□□□ 0.15
TPM1-202ENST00000288398 TSGA10IPQ3SY00 556 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 POTEBQ6S5H4 581 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 PLPPR4Q7Z2D5 763 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 OSBPL7Q9BZF2 842 aa15.99■□□□□ 0.15
TPM1-202ENST00000288398 NSUN3Q9H649 340 aaKnown RBP15.99■□□□□ 0.15
TPM1-202ENST00000288398 AGO4Q9HCK5 861 aaKnown RBP15.99■□□□□ 0.15
TPM1-202ENST00000288398 RB1P06400 928 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 STAG3L1P0CL83 205 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 ARP10275 920 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 CD52P31358 61 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 SSTR3P32745 418 aaPredicted RBP15.98■□□□□ 0.15
TPM1-202ENST00000288398 TMEM62Q0P6H9 643 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 ADCK5Q3MIX3 580 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 LEXMQ3ZCV2 418 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 MARCH8Q5T0T0 291 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 JAKMIP3Q5VZ66 844 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 MIS18BP1Q6P0N0 1132 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 NIPA1Q7RTP0 329 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 PLA2G4DQ86XP0 818 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 CKAP2LQ8IYA6 745 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 C6orf50Q9HD87 102 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
TPM1-202ENST00000288398 TMEM260Q9NX78 707 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 LRFN2Q9ULH4 789 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 SQORQ9Y6N5 450 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 REV3LO60673 3130 aa15.98■□□□□ 0.15
TPM1-202ENST00000288398 RBAK-RBAKDNI3L0D1 243 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 MEIS1O00470 390 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 ENPP3O14638 875 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 NCK2O43639 380 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 SCG2P13521 617 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 IBSPP21815 317 aaPredicted RBP15.97■□□□□ 0.15
TPM1-202ENST00000288398 KRT76Q01546 638 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 ODR4Q5SWX8 454 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 PTCRAQ6ISU1 281 aaPredicted RBP15.97■□□□□ 0.15
TPM1-202ENST00000288398 TYW1BQ6NUM6 668 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 BLOC1S2Q6QNY1 142 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 NME8Q8N427 588 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 PPP2R3CQ969Q6 453 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms