RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 USP20Q9Y2K6 914 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 ARHGEF35A5YM69 484 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 PPP1R3GB7ZBB8 358 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 MYL5Q02045 173 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 PPP2R5CQ13362 524 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 TLL2Q9Y6L7 1015 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 KDM3AQ9Y4C1 1321 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.81□□□□□ -0.04
ACER3-201ENST00000278544 NKRFO15226 690 aaKnown RBP eCLIP14.81□□□□□ -0.04
ACER3-201ENST00000278544 TXNP10599 105 aaKnown RBP14.81□□□□□ -0.04
ACER3-201ENST00000278544 CASP5P51878 434 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 GOLGA8FQ08AF8 430 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 KCNA1Q09470 495 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 GOLGA8DPQ0D2H9 430 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 NCAPHQ15003 741 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 SFR1Q86XK3 245 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 KIAA0895Q8NCT3 520 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 NPLOC4Q8TAT6 608 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 PPP1R16BQ96T49 567 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 MROH8Q9H579 483 aa14.81□□□□□ -0.04
ACER3-201ENST00000278544 SEPT9Q9UHD8 586 aaPredicted RBP14.81□□□□□ -0.04
ACER3-201ENST00000278544 SLC10A3P09131 477 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 MTERF2Q49AM1 385 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 MYCT1Q8N699 235 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 GLG1Q92896 1179 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 RIT2Q99578 217 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 STK17AQ9UEE5 414 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 PNMA2Q9UL42 364 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 SYNRGQ9UMZ2 1314 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 MANSC4A6NHS7 340 aaPredicted RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 FAM155AB1AL88 458 aaPredicted RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 NOP56O00567 594 aaKnown RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 ZNF862O60290 1169 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 SLC12A3P55017 1021 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 COASYQ13057 564 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 EPHA7Q15375 998 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 ZC2HC1CQ53FD0 456 aaPredicted RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 TRIM44Q96DX7 344 aaPredicted RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 TRIM47Q96LD4 638 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 KIFC3Q9BVG8 833 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 TBC1D22BQ9NU19 505 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 KIAA1217Q5T5P2 1943 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 WDR64B1ANS9 1081 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 PRPF6O94906 941 aaKnown RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 NMT1P30419 496 aaKnown RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 QARSP47897 775 aaKnown RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 SPATA20Q8TB22 786 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 CAPNS2Q96L46 248 aa14.8□□□□□ -0.04
ACER3-201ENST00000278544 PYM1Q9BRP8 204 aaKnown RBP14.8□□□□□ -0.04
ACER3-201ENST00000278544 TNPO2O14787 897 aaKnown RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 YWHABP31946 246 aaKnown RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 IGBP1P78318 339 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 DEFB115Q30KQ5 88 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 RINT1Q6NUQ1 792 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 PLEKHH3Q7Z736 793 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 DNAJC19Q96DA6 116 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 PCDHA10Q9Y5I2 948 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 P4HBP07237 508 aaKnown RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 GCLCP48506 637 aaPredicted RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 ARID5BQ14865 1188 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 ZNF658Q5TYW1 1059 aaPredicted RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 MLKLQ8NB16 471 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 DNERQ8NFT8 737 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 CCDC47Q96A33 483 aaKnown RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 XPO4Q9C0E2 1151 aaKnown RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 TBCAO75347 108 aaKnown RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 FAM102BQ5T8I3 360 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 NT5DC1Q5TFE4 455 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 TRAPPC12Q8WVT3 735 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 GPRASP2Q96D09 838 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 CEP170P1Q96L14 293 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 NAP1L5Q96NT1 182 aaPredicted RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 C7orf25Q9BPX7 421 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 VPS16Q9H269 839 aa14.79□□□□□ -0.04
ACER3-201ENST00000278544 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 MORC2Q9Y6X9 1032 aaPredicted RBP14.79□□□□□ -0.04
ACER3-201ENST00000278544 SPATA31C2B4DYI2 1134 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 FAM13AO94988 1023 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 GCNT3O95395 438 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 CTGFP29279 349 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 PAK1Q13153 545 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 FAM26FQ5R3K3 315 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 PADI6Q6TGC4 694 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 DHX37Q8IY37 1157 aaKnown RBP14.78□□□□□ -0.04
ACER3-201ENST00000278544 SPATA33Q96N06 139 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 HSD3B7Q9H2F3 369 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 ZSWIM4Q9H7M6 989 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 MRPL44Q9H9J2 332 aaKnown RBP14.78□□□□□ -0.04
ACER3-201ENST00000278544 MYBP10242 640 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 GIT2Q14161 759 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 FAM110CQ1W6H9 321 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 SRRTQ9BXP5 876 aaKnown RBP14.78□□□□□ -0.04
ACER3-201ENST00000278544 BCRP11274 1271 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 TCF7P36402 384 aaPredicted RBP14.78□□□□□ -0.04
ACER3-201ENST00000278544 CAP1Q01518 475 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 NACC1Q96RE7 527 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 RMND1Q9NWS8 449 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 FLRT1Q9NZU1 646 aa14.78□□□□□ -0.04
ACER3-201ENST00000278544 LAMA2P24043 3122 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms