RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 KLF1Q13351 362 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 PCBP2Q15366 365 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZNF438Q7Z4V0 828 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CCDC83Q8IWF9 413 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PDILTQ8N807 584 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 SLC30A5Q8TAD4 765 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 NOC3LQ8WTT2 800 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 NGLY1Q96IV0 654 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 NAT10Q9H0A0 1025 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 TNMDQ9H2S6 317 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 IFT22Q9H7X7 185 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PHAXQ9H814 394 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 FBRSQ9HAH7 460 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CNNM1Q9NRU3 951 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ABI2Q9NYB9 513 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 PCDHB14Q9Y5E9 798 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 SLC12A7Q9Y666 1083 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ATP10DQ9P241 1426 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ACEP12821 1306 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 NUP98P52948 1817 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 MASP2O00187 686 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ARNTLO00327 626 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 SHOXO15266 292 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 GLRX3O76003 335 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 B3GALT4O96024 378 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CKMP06732 381 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CCDC192P0DO97 292 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 GALNSP34059 522 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 UBA7P41226 1012 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ADCYAP1R1P41586 468 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 GRIA2P42262 883 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 STT3AP46977 705 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ITKQ08881 620 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PICALMQ13492 652 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 STK38Q15208 465 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ANKRD1Q15327 319 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PKN2Q16513 984 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 CCDC57Q2TAC2 916 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PLA2G2CQ5R387 149 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TTC39AQ5SRH9 613 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZSCAN30Q86W11 494 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 FAM193BQ96PV7 902 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 ASB2Q96Q27 587 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZKSCAN3Q9BRR0 538 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CEP44Q9C0F1 390 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 EPS15L1Q9UBC2 864 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 HOOK1Q9UJC3 728 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 FBXO10Q9UK96 956 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 IL16Q14005 1332 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PI4KAP2A4QPH2 592 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 RASA4BC9J798 803 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 RASA4O43374 803 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 OPA1O60313 960 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TRIM37O94972 964 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 MAP3K6O95382 1288 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 FOXO1Q12778 655 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZNF460Q14592 562 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 SNX17Q15036 470 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TAF11Q15544 211 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CWF19L2Q2TBE0 894 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 SLC27A3Q5K4L6 730 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 SNAP47Q5SQN1 464 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 SAMD5Q5TGI4 173 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 RETSATQ6NUM9 610 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CCDC129Q6ZRS4 1044 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PPP1R42Q7Z4L9 355 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZBTB46Q86UZ6 589 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 MRPL50Q8N5N7 158 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 GOLGA6L1Q8N7Z2 621 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PI4KAP1Q8N8J0 262 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 RNF152Q8N8N0 203 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 DNAAF4Q8WXU2 420 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 JARID2Q92833 1246 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 NXPE3Q969Y0 559 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZNF496Q96IT1 587 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 FAXDC2Q96IV6 333 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 LIN7BQ9HAP6 207 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZNF277Q9NRM2 450 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 TSR3Q9UJK0 312 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 CTDP1Q9Y5B0 961 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 COL4A6Q14031 1691 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TRBV23-1A0A0A0MS06 115 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 MAGEB6P1A0A0J9YX57 407 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 EFSO43281 561 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TLL1O43897 1013 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 SMC2O95347 1197 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 BAG4O95429 457 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 ADRB2P07550 413 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 CNGA1P29973 690 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TNNT3P45378 269 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 RECQLP46063 649 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 RNF144AP50876 292 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 SUMO1P63165 101 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 TTC22Q5TAA0 569 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 KIF6Q6ZMV9 814 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZNF771Q7L3S4 317 aaPredicted RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 OR8H2Q8N162 312 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 POF1BQ8WVV4 589 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ARHGAP45Q92619 1136 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZSCAN31Q96LW9 406 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms