RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GNGT2O14610 69 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 EIF4A3P38919 411 aaKnown RBP12.83□□□□□ -0.36
SHPRH-201ENST00000275233 TSR3Q9UJK0 312 aaKnown RBP12.83□□□□□ -0.36
SHPRH-201ENST00000275233 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
SHPRH-201ENST00000275233 MCAMP43121 646 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 TRAPPC10P48553 1259 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 MXI1P50539 228 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 ZSCAN26Q16670 478 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 PAGE5Q96GU1 130 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 BHMT2Q9H2M3 363 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 GPR108Q9NPR9 543 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 STK17AQ9UEE5 414 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 GCFC2P16383 781 aaKnown RBP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 SPOPLQ6IQ16 392 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 TMC4Q7Z404 712 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 FGD4Q96M96 766 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 GBP5Q96PP8 586 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 ECE2O60344 883 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 ECEL1O95672 775 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 C2orf69Q8N8R5 385 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 INTS9Q9NV88 658 aaKnown RBP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 LMNB2Q03252 620 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 SCN4BQ8IWT1 228 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 TRIM11Q96F44 468 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 PCDHA6Q9UN73 950 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 PCDHA8Q9Y5H6 950 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 CEP170Q5SW79 1584 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 ADGRL2O95490 1459 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 LIG3P49916 1009 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 STAP2Q9UGK3 403 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 ZNF233A6NK53 670 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 SPECC1L-ADORA2AF8WAN1 911 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 GSTA4O15217 222 aa12.82□□□□□ -0.36
SHPRH-201ENST00000275233 FKBP3Q00688 224 aaKnown RBP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 NSUN2Q08J23 767 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.82□□□□□ -0.36
SHPRH-201ENST00000275233 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PRPF3O43395 683 aaKnown RBP12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PMLP29590 882 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 ETF1P62495 437 aaKnown RBP12.81□□□□□ -0.36
SHPRH-201ENST00000275233 MTMR1Q13613 665 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 SMAD1Q15797 465 aaKnown RBP12.81□□□□□ -0.36
SHPRH-201ENST00000275233 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 CASP1P29466 404 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 STX1BP61266 288 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 FAM160B2Q86V87 743 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 TLK1Q9UKI8 766 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 FRMD3A2A2Y4 597 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 TTC4O95801 387 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 IL9RQ01113 521 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 TEX2Q8IWB9 1127 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PCDHA13Q9Y5I0 950 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PSMA2P25787 234 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PRDX5P30044 214 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PPP6R3Q5H9R7 873 aaPredicted RBP12.81□□□□□ -0.36
SHPRH-201ENST00000275233 ANGPTL8Q6UXH0 198 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PCGF5Q86SE9 256 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 SLC44A5Q8NCS7 719 aa12.81□□□□□ -0.36
SHPRH-201ENST00000275233 PPWD1Q96BP3 646 aaKnown RBP12.81□□□□□ -0.36
SHPRH-201ENST00000275233 MRPL47Q9HD33 250 aaKnown RBP12.81□□□□□ -0.36
SHPRH-201ENST00000275233 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
SHPRH-201ENST00000275233 WDR64B1ANS9 1081 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 PLS3P13797 630 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHPRH-201ENST00000275233 TMEM260Q9NX78 707 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.363e-7■■■□□ 18.4
SHPRH-201ENST00000275233 NEDD4P46934 1319 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 ERVV-1B6SEH8 477 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 RMDN3Q96TC7 470 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 A0A1W2PQ27 194 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 A0A1W2PQ64 194 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 A0A1W2PQD8 194 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 DENND3A2RUS2 1198 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 NCF2P19878 526 aaPredicted RBP12.8□□□□□ -0.36
SHPRH-201ENST00000275233 CCT5P48643 541 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
SHPRH-201ENST00000275233 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 CPSF2Q9P2I0 782 aaKnown RBP12.8□□□□□ -0.36
SHPRH-201ENST00000275233 RWDD2AQ9UIY3 292 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 POTEMA6NI47 508 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 CYP27A1Q02318 531 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 BBS9Q3SYG4 887 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 ZBTB41Q5SVQ8 909 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 TWF2Q6IBS0 349 aaKnown RBP12.8□□□□□ -0.36
SHPRH-201ENST00000275233 SZRD1Q7Z422 152 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 ERICH1Q86X53 443 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms