RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 ZNF396Q96N95 335 aaPredicted RBP17.51■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TRPC6Q9Y210 931 aa17.51■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ATP11BQ9Y2G3 1177 aa17.51■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ARID2Q68CP9 1835 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 IGSF9BQ9UPX0 1349 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 LAD1O00515 517 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ATG7O95352 703 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 CAPN2P17655 700 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 NUCB2P80303 420 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 STK38Q15208 465 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 LRRC26Q2I0M4 334 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TRIM60Q495X7 471 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PDXDC2PQ6P474 469 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 B3GNT9Q6UX72 402 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SLC39A5Q6ZMH5 540 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 C7orf31Q8N865 590 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SMARCAD1Q9H4L7 1026 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ERAP1Q9NZ08 941 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 GRIN2DO15399 1336 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TCHHQ07283 1943 aa17.5■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PP2D1A8MPX8 630 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 LGR5O75473 907 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 RTP1P59025 263 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 IL17AQ16552 155 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 DTHD1Q6ZMT9 781 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PCDH10Q9P2E7 1040 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 IGKV6D-21A0A0A0MT36 114 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 BMP15O95972 392 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 IGBP1P78318 339 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PRKCEQ02156 737 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 CTTNQ14247 550 aaKnown RBP17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 DYDC2Q96IM9 177 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 LXNQ9BS40 222 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 RNPEPQ9H4A4 650 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 RGL1Q9NZL6 768 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 LRWD1Q9UFC0 647 aa17.49■□□□□ 0.39
ATP6V1C2-201ENST00000272238 KAT6AQ92794 2004 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ARVCFO00192 962 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SMIM10L2AP0DMW4 78 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SMIM10L2BP0DMW5 78 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 CDC25AP30304 524 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PRPHP41219 470 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 GRIN1Q05586 938 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PTPAQ15257 358 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ZRSR1Q15695 479 aaKnown RBP17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 RDM1Q8NG50 284 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 AFAP1L1Q8TED9 768 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ATP6V0A1Q93050 837 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 EIF2AK1Q9BQI3 630 aaKnown RBP17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TRMT13Q9NUP7 481 aaKnown RBP17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 HDAC6Q9UBN7 1215 aa17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SEPT9Q9UHD8 586 aaPredicted RBP17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TMEM150BA6NC51 233 aa17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 HAS3O00219 553 aa17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PLCB4Q15147 1175 aa17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 EPHA7Q15375 998 aa17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 C7orf61Q8IZ16 206 aa17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SNX29Q8TEQ0 813 aa17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 WRAP73Q9P2S5 460 aaPredicted RBP17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
ATP6V1C2-201ENST00000272238 POTEB3A0JP26 581 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ZNF862O60290 1169 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 OATP04181 439 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 NASPP49321 788 aaPredicted RBP17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PPFIA1Q13136 1202 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ARL6IP4Q66PJ3 421 aaKnown RBP17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 POTEBQ6S5H4 581 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TPH2Q8IWU9 490 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 ERMNQ8TAM6 284 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TRAPPC12Q8WVT3 735 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SH2D3AQ9BRG2 576 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 HTATIP2Q9BUP3 242 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 TRPV6Q9H1D0 765 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 PRDM5Q9NQX1 630 aaPredicted RBP17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 SETD4Q9NVD3 440 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 NOD1Q9Y239 953 aa17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 MAFBQ9Y5Q3 323 aaPredicted RBP17.46■□□□□ 0.39
ATP6V1C2-201ENST00000272238 B4GALT4O60513 344 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 MED24O75448 989 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 P4HBP07237 508 aaKnown RBP17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 ATP4AP20648 1035 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 PSMC5P62195 406 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 KRT85P78386 507 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 ZNF200P98182 395 aaPredicted RBP17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 TLE2Q04725 743 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 SNX17Q15036 470 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 SPECC1Q5M775 1068 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 HAUS3Q68CZ6 603 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 GDF6Q6KF10 455 aaPredicted RBP17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 NFRKBQ6P4R8 1299 aa17.45■□□□□ 0.38
ATP6V1C2-201ENST00000272238 POTEGQ6S5H5 508 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms