RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.74■□□□□ 0.277e-7■■□□□ 13.7
TIMP3-201ENST00000266085 GFPT2O94808 682 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 RASA1P20936 1047 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 GABPB1Q06547 395 aaPredicted RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 IFRD2Q12894 506 aaPredicted RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 GEN1Q17RS7 908 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 CLEC17AQ6ZS10 378 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 SFR1Q86XK3 245 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 CTAGE3PQ8IX95 158 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 IPO5O00410 1097 aaKnown RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 NDUFA10O95299 355 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 ABL1P00519 1130 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 ACRBPQ8NEB7 543 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 ZNF653Q96CK0 615 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 TBC1D31Q96DN5 1066 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 TRIM11Q96F44 468 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 FAM49AQ9H0Q0 323 aaPredicted RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 SOWAHDA6NJG2 315 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 DPEP1P16444 411 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 EIF4A3P38919 411 aaKnown RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 KRT76Q01546 638 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
TIMP3-201ENST00000266085 PADI6Q6TGC4 694 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
TIMP3-201ENST00000266085 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 POTEIP0CG38 1075 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 PPARDQ03181 441 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 CEP85LQ5SZL2 805 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 SHC4Q6S5L8 630 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 P3H4Q92791 437 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 CABS1Q96KC9 395 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 UBE2TQ9NPD8 197 aaPredicted RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 KDM6AO15550 1401 aaPredicted RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 HAUS2Q9NVX0 235 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 KDM4FA0A1W2PPD8 638 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 TRIM49BA6NDI0 452 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 SARNPP82979 210 aaKnown RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 CYP27A1Q02318 531 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 SLC10A5Q5PT55 438 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 MCPH1Q8NEM0 835 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 FAM205CA6NFA0 338 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 MYCP01106 439 aaPredicted RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 FDX1P10109 184 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 ATP2C1P98194 919 aaPredicted RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 STYK1Q6J9G0 422 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 RABEP2Q9H5N1 569 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 RPAP3Q9H6T3 665 aaPredicted RBP16.73■□□□□ 0.27
TIMP3-201ENST00000266085 ODF2LQ9ULJ1 636 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 CD2APQ9Y5K6 639 aa16.73■□□□□ 0.27
TIMP3-201ENST00000266085 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 PSMD14O00487 310 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 GUCY2DQ02846 1103 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 BFSP1Q12934 665 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 MAP7D3Q8IWC1 876 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 ABI1Q8IZP0 508 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 NHEJ1Q9H9Q4 299 aaPredicted RBP16.72■□□□□ 0.27
TIMP3-201ENST00000266085 SCAF8Q9UPN6 1271 aaKnown RBP16.72■□□□□ 0.27
TIMP3-201ENST00000266085 PRCPP42785 496 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 PALM2Q8IXS6 379 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 RAD54LQ92698 747 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 MAGOHBQ96A72 148 aaKnown RBP16.72■□□□□ 0.27
TIMP3-201ENST00000266085 ACAD9Q9H845 621 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 ZNF233A6NK53 670 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 THAP12O43422 761 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 PSMC4P43686 418 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 USP11P51784 963 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 SPTLC3Q9NUV7 552 aa16.72■□□□□ 0.27
TIMP3-201ENST00000266085 MAP2P11137 1827 aaKnown RBP16.72■□□□□ 0.27
TIMP3-201ENST00000266085 PPLO60437 1756 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 SERPING1P05155 500 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 PDZD4Q76G19 769 aaPredicted RBP16.71■□□□□ 0.27
TIMP3-201ENST00000266085 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 FAM151AQ8WW52 585 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 FAM149B1Q96BN6 582 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 TYW1Q9NV66 732 aaKnown RBP16.71■□□□□ 0.27
TIMP3-201ENST00000266085 NYAP2Q9P242 653 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 ADAMTS1Q9UHI8 967 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 PXDNQ92626 1479 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 QARSP47897 775 aaKnown RBP16.71■□□□□ 0.27
TIMP3-201ENST00000266085 MTMR2Q13614 643 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 CCDC110Q8TBZ0 833 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 KRT12Q99456 494 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 MFAP3LO75121 409 aa16.71■□□□□ 0.27
TIMP3-201ENST00000266085 MAPK4P31152 587 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms